ggKbase home page

qh_3_scaffold_427

Search features with annotation key words

Displaying 19 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_3_scaffold_427_1
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..1466)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DD85_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ33430.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
qh_3_scaffold_427_2
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1637..2881
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D4Y6_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH38747.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 1
qh_3_scaffold_427_3
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3013..4662)
DNA (1650bp) protein (550aa)
Choline dehydrogenase-like flavoprotein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H200_9EURY
Choline dehydrogenase-like flavoprotein {ECO:0000313|EMBL:ELZ78500.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsen
glucose-methanol-choline oxidoreductase
qh_3_scaffold_427_4
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4652..5239)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HMU4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ78499.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
hypothetical protein
qh_3_scaffold_427_5
unknown

Not on your lists

comp(5236..6150)
DNA (915bp) protein (305aa)

This feature has no annotations

qh_3_scaffold_427_6
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6323..7600)
DNA (1278bp) protein (426aa)
UDP-glucose 6-dehydrogenase / nucleotide sugar dehydrogenase {ECO:0000313|EMBL:AEM59289.1}; EC=1.1.1.- {ECO:0000313|EMBL:AEM59289.1};; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halob
UDP-glucose 6-dehydrogenase / nucleotide sugar dehydrogenase n=2 Tax=Haloarcula hispanica RepID=G0I068_HALHT
UDP-glucose 6-dehydrogenase
qh_3_scaffold_427_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7637..8725)
DNA (1089bp) protein (363aa)
Family 2 glycosyl transferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CGE6_9EURY
Family 2 glycosyl transferase {ECO:0000313|EMBL:ELZ22326.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
family 2 glycosyl transferase
qh_3_scaffold_427_8
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9382..10497)
DNA (1116bp) protein (372aa)
Glucose fructose oxidoreductase n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P686_9EURY
Glucose fructose oxidoreductase {ECO:0000313|EMBL:KKF40010.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;
gfo3; glucose fructose oxidoreductase
qh_3_scaffold_427_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10603..11739)
DNA (1137bp) protein (379aa)
Group 1 glycosyl transferase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QW43_9EURY
Group 1 glycosyl transferase {ECO:0000313|EMBL:EFW91177.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihal
group 1 glycosyl transferase
qh_3_scaffold_427_10
unknown

Not on your lists

comp(11898..12224)
DNA (327bp) protein (109aa)

This feature has no annotations

qh_3_scaffold_427_11
unknown

Not on your lists

12461..12577
DNA (117bp) protein (39aa)

This feature has no annotations

qh_3_scaffold_427_12
unknown

Not on your lists

comp(12545..12712)
DNA (168bp) protein (56aa)

This feature has no annotations

qh_3_scaffold_427_13
unknown

Not on your lists

12950..13144
DNA (195bp) protein (65aa)

This feature has no annotations

qh_3_scaffold_427_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13258..13803)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIW9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22317.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_3_scaffold_427_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14599..15300
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CI42_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22313.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_3_scaffold_427_16
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15553..16497
DNA (945bp) protein (315aa)
Transcription initiation factor IIB n=2 Tax=Halorhabdus RepID=C7NMT2_HALUD
Transcription factor TFIIB cyclin-related
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
qh_3_scaffold_427_17
unknown

Not on your lists

16584..16718
DNA (135bp) protein (45aa)

This feature has no annotations

qh_3_scaffold_427_18
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18107..19639
DNA (1533bp) protein (511aa)
ORC1-type DNA replication protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XP23_9EURY
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme
cdc6_5; cell division control protein cdc6-like protein
qh_3_scaffold_427_19
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20081..20359
DNA (279bp) protein (93aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase protein {ECO:0000313|EMBL:ERJ04726.1}; EC=2.7.7.23 {ECO:0000313|EMBL:ERJ04726.1};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriale
Glucose-1-phosphate thymidylyltransferase protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2DY33_9EURY
Displaying 19 items

View Taxonomy
NameRatio
Halobacteria
68.42%
unknown
31.58%
Halobacteria: 0.6842105263157895unknown: 0.3157894736842105Halobacteriaunknown