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qh_3_scaffold_1695

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_3_scaffold_1695_1
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(148..1188)
DNA (1041bp) protein (347aa)
Ribonuclease R n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0B010_NATA1
Ribonuclease R {ECO:0000313|EMBL:ELZ03902.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 700177 / DSM
Exoribonuclease II
qh_3_scaffold_1695_2
unknown

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1260..1487
DNA (228bp) protein (76aa)

This feature has no annotations

qh_3_scaffold_1695_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2019..2321)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MF91_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43364.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_3_scaffold_1695_4
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2410..2889
DNA (480bp) protein (160aa)
ArCOG04150 universal archaeal PUA-domain protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DXK6_9EURY
ArCOG04150 universal archaeal PUA-domain protein {ECO:0000313|EMBL:CDK41069.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Haloru
conserved protein with predicted RNA binding PUA domain
qh_3_scaffold_1695_5
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3029..3526)
DNA (498bp) protein (166aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1230451 sp
Formate--tetrahydrofolate ligase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KZR6_HALAR
formate--tetrahydrofolate ligase
qh_3_scaffold_1695_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3612..4796)
DNA (1185bp) protein (395aa)
Peptidase M29 aminopeptidase II n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ML98_9EURY
Peptidase M29 aminopeptidase II {ECO:0000313|EMBL:EMA46148.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharo
peptidase M29 aminopeptidase II
qh_3_scaffold_1695_7
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(5118..6248)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SJG4_9EURY
putative sorbitol dehydrogenase Tax=RBG_16_Bathyarchaeota_48_13_curated
alcohol dehydrogenase
qh_3_scaffold_1695_8
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6312..7532
DNA (1221bp) protein (407aa)
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CXT0_9RHIZ
TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:EDQ35717.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae;
hpsK; Dihydroxypropanesulfonate (DHPS) TRAP transporter
qh_3_scaffold_1695_9
Grimontia hollisae, Grimontia, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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7646..8197
DNA (552bp) protein (184aa)
TRAP dicarboxylate transporter DctQ subunit n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I9P9_GRIHO
TRAP dicarboxylate transporter DctQ subunit {ECO:0000313|EMBL:EEY71764.1}; TaxID=675812 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Grimontia.;" source="Grimonti
dctQ6; TRAP transporter small permease subunit DctQ
qh_3_scaffold_1695_10
Grimontia hollisae, Grimontia, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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8200..9480
DNA (1281bp) protein (427aa)
C4-dicarboxylate ABC transporter n=1 Tax=Enterovibrio calviensis RepID=UPI0002F3A6A1
TRAP-type C4-dicarboxylate transport system large permease component {ECO:0000313|EMBL:EEY71765.1}; TaxID=675812 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Grim
putative TRAP-type C4-dicarboxylate transport system, large permease component DctM
qh_3_scaffold_1695_11
unknown

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9585..9755
DNA (171bp) protein (57aa)

This feature has no annotations

Displaying 11 items

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