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qh_3_scaffold_171

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Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_3_scaffold_171_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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282..1205
DNA (924bp) protein (308aa)
RimK domain-containing protein ATP-grasp n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7G6_9EURY
RimK domain-containing protein ATP-grasp {ECO:0000313|EMBL:EMA53887.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
RimK domain-containing protein ATP-grasp
qh_3_scaffold_171_2
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1342..1737)
DNA (396bp) protein (132aa)
Heat shock protein Hsp20 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QTS9_9EURY
heat shock protein
Heat shock protein Hsp20 {ECO:0000313|EMBL:EFW92008.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophi
qh_3_scaffold_171_3
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1879..2892)
DNA (1014bp) protein (338aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00559, ECO:0000256|RuleBase:RU003388}; Short=GAPDH {ECO:0000256|HAMAP-Rule:MF_00559};; EC=1.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00559,
gap; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)) (phosphorylating) (EC:1.2.1.59)
Glyceraldehyde-3-phosphate dehydrogenase n=2 Tax=Halococcus hamelinensis RepID=M0M6Z8_9EURY
qh_3_scaffold_171_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3360..4091
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZS2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49920.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_3_scaffold_171_5
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4353..5825
DNA (1473bp) protein (491aa)
ATP-grasp protein-like protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XBE3_9EURY
ATP-grasp protein-like protein {ECO:0000313|EMBL:ELY58962.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius inn
putative ATP-grasp enzyme
qh_3_scaffold_171_6
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5836..6492
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DG83_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ33737.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
qh_3_scaffold_171_7
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6565..7254
DNA (690bp) protein (230aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000256|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000256|HAMAP-Rule:M
pimT1; protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MTH6_HALMO
qh_3_scaffold_171_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7443..8183
DNA (741bp) protein (247aa)
Protein-L-isoaspartate(D-aspartate) O-methyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUB7_9EURY
Protein-L-isoaspartate(D-aspartate) O-methyltransferase {ECO:0000313|EMBL:ELZ26821.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" sou
protein-L-isoaspartate O-methyltransferase
qh_3_scaffold_171_trna_1
unknown

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8359..8431
DNA (73bp)
transferRNA
qh_3_scaffold_171_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8457..8882
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=2 Tax=Haladaptatus paucihalophilus RepID=E7QTR2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW91991.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
Protein of unknown function (DUF3257)
qh_3_scaffold_171_10
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9044..9274
DNA (231bp) protein (77aa)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit H n=1 Tax=Halobacterium sp. DL1 RepID=G4IAE4_9EURY
RNA polymerase Rpb5
qh_3_scaffold_171_11
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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9271..10752
DNA (1482bp) protein (494aa)
DNA-directed RNA polymerase subunit B n=4 Tax=Halorubrum RepID=M0D7L7_9EURY
RNA polymerase beta subunit {ECO:0000313|EMBL:AEH36361.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain D
DNA-directed RNA polymerase subunit beta''
qh_3_scaffold_171_12
Halococcus sp. 197A, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10858..12684
DNA (1827bp) protein (609aa)
rpoB; DNA-directed RNA polymerase subunit B' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] id=24646171 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1197130 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
qh_3_scaffold_171_13

Not on your lists

12733..15576
DNA (2844bp) protein (948aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
DNA-directed RNA polymerase, subunit A n=1 Tax=uncultured archaeon A07HB70 RepID=V4XWT6_9ARCH
qh_3_scaffold_171_14
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15569..16807
DNA (1239bp) protein (413aa)
rpoA''; DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A'' {ECO:0000256|HAMAP-Rule:MF_00411}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00411};; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
DNA-directed RNA polymerase subunit A'' n=2 Tax=Haloarcula hispanica RepID=G0HSR2_HALHT
qh_3_scaffold_171_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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16822..17292
DNA (471bp) protein (157aa)
Transcription elongation factor NusA-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVX7_9EURY
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source=
NusA family KH domain protein
qh_3_scaffold_171_16
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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17387..17815
DNA (429bp) protein (143aa)
30S ribosomal protein S12 n=2 Tax=Halobacterium salinarum RepID=RS12_HALS3
rps12P; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000255|HAMAP-Rule:MF_00403}; HmaS12; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacteri
qh_3_scaffold_171_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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17819..18433
DNA (615bp) protein (205aa)
30S ribosomal protein S7 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCA1_9EURY
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480, ECO:0000256|RuleBase:RU003621}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
30S ribosomal protein S7P
qh_3_scaffold_171_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(18631..19383)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Halococcus hamelinensis RepID=UPI000299E93E
Uncharacterized protein {ECO:0000313|EMBL:EMA43375.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_3_scaffold_171_19
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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20077..22263
DNA (2187bp) protein (729aa)
Elongation factor 2 n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CND8_9EURY
Elongation factor 2 {ECO:0000256|HAMAP-Rule:MF_00054, ECO:0000256|SAAS:SAAS00088569}; Short=EF-2 {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natria
translation elongation factor aEF-2
qh_3_scaffold_171_20
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(22467..22850)
DNA (384bp) protein (128aa)
HTH DNA binding domain family protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9ZBC8_9EURY
HTH DNA binding domain family protein {ECO:0000313|EMBL:ELY82912.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 1
HTH DNA binding domain family protein
qh_3_scaffold_171_21
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(22889..23083)
DNA (195bp) protein (65aa)
HTH DNA binding domain family protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9ZBC8_9EURY
HTH DNA binding domain family protein {ECO:0000313|EMBL:ELY82912.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 1
HTH DNA binding domain family protein
qh_3_scaffold_171_22
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(23128..23604)
DNA (477bp) protein (159aa)
Putative cyclase n=1 Tax=Natrinema gari JCM 14663 RepID=L9ZA91_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG02021.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
qh_3_scaffold_171_23
Thermococcus sp. 4557, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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23733..24392
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) RepID=G0HMQ3_THES4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK72490.1}; TaxID=1042877 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sp. (strain CGM
qh_3_scaffold_171_24
unknown

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comp(24489..24767)
DNA (279bp) protein (93aa)

This feature has no annotations

qh_3_scaffold_171_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(25276..26172)
DNA (897bp) protein (299aa)
Sec-independent protein translocase component TatC 1 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MD81_9EURY
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source
tatC; twin-arginine translocation protein TatC
qh_3_scaffold_171_26
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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26472..28241
DNA (1770bp) protein (590aa)
Sec-independent periplasmic protein translocase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N5Q3_9EURY
Sec-independent periplasmic protein translocase {ECO:0000313|EMBL:EMA52888.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
Sec-independent periplasmic protein translocase
qh_3_scaffold_171_27
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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28187..28789
DNA (603bp) protein (201aa)
Sec-independent periplasmic protein translocase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MWF5_HALMO
Sec-independent periplasmic protein translocase {ECO:0000313|EMBL:EMA48775.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
tatC; twin-arginine translocation protein TatC
qh_3_scaffold_171_28
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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28978..29232
DNA (255bp) protein (85aa)
Putative CopG/Arc/MetJ family transcriptional regulator n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J5Y7_HALJB
putative CopG/Arc/MetJ family transcriptional regulator
Putative CopG/Arc/MetJ family transcriptional regulator {ECO:0000313|EMBL:ELY34161.1}; Putative transcriptional regulator, CopG/Arc/MetJ family protein {ECO:0000313|EMBL:ADJ13793.1}; TaxID=795797 spec
qh_3_scaffold_171_29
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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29225..29941
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZGE2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59745.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
Displaying items 1-30 of 31 in total

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