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qh_3_scaffold_2160

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_3_scaffold_2160_1
unknown

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comp(2..235)
DNA (234bp) protein (78aa)

This feature has no annotations

qh_3_scaffold_2160_2
Nodularia spumigena, Nodularia, Nostocales, Cyanobacteria, Bacteria

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599..2203
DNA (1605bp) protein (535aa)
Twin-arginine translocation pathway signal n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZCI9_NODSP
Uncharacterized protein {ECO:0000313|EMBL:AHJ30985.1}; TaxID=313624 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nodularia.;" source="Nodularia spumigena CCY9414.;"
phosphoesterase, PA-phosphatase-like protein
qh_3_scaffold_2160_3
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2284..2964)
DNA (681bp) protein (227aa)
UMUC domain protein DNA-repair protein (EC:2.7.7.7); K04479 DNA polymerase IV (archaeal DinB-like DNA polymerase) [EC:2.7.7.7] id=24616338 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1324957 species="Archaea; Euryarchaeota; Halo
nucleotidyltransferase/DNA polymerase
qh_3_scaffold_2160_4
unknown

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comp(3712..4251)
DNA (540bp) protein (180aa)

This feature has no annotations

qh_3_scaffold_2160_5
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4481..4723
DNA (243bp) protein (81aa)
hypothetical protein id=24614959 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP88468.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qh_3_scaffold_2160_6

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comp(4785..5633)
DNA (849bp) protein (283aa)
Threonine ammonia-lyase (EC:4.3.1.19)
Threonine ammonia-lyase {ECO:0000313|EMBL:AEN06953.1}; EC=4.3.1.19 {ECO:0000313|EMBL:AEN06953.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Threonine ammonia-lyase n=1 Tax=halophilic archaeon DL31 RepID=G2MN24_9ARCH
qh_3_scaffold_2160_7
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(5834..6274)
DNA (441bp) protein (147aa)
Putative permease n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AMB8_NATGS
permease
Putative permease {ECO:0000313|EMBL:AFZ74185.1}; Uncharacterized protein {ECO:0000313|EMBL:ELY63641.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrono
qh_3_scaffold_2160_8
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6705..7091)
DNA (387bp) protein (129aa)
ArsR family transcriptional regulator n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGS9_9EURY
ArsR family transcriptional regulator {ECO:0000313|EMBL:ELZ33927.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometri
ArsR family transcriptional regulator
qh_3_scaffold_2160_9
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7224..7517
DNA (294bp) protein (98aa)
N-acetyltransferase GCN5 n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D5U6_9EURY
N-acetyltransferase GCN5 {ECO:0000313|EMBL:ELZ30850.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
N-acetyltransferase GCN5
qh_3_scaffold_2160_10
unknown

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comp(7407..7643)
DNA (237bp) protein (79aa)

This feature has no annotations

qh_3_scaffold_2160_11
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7733..9202
DNA (1470bp) protein (490aa)
Zn-dependent protease-like protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DEH3_9EURY
Zn-dependent protease-like protein {ECO:0000313|EMBL:ELZ33870.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum
zn-dependent protease-like protein
qh_3_scaffold_2160_12
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(9068..10261)
DNA (1194bp) protein (398aa)
Oligopeptide/dipeptide ABC transporter ATP-binding protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGC9_9EURY
Oligopeptide/dipeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ33868.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;"
oligopeptide/dipeptide ABC transporter ATP-binding protein
qh_3_scaffold_2160_13
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10262..11272)
DNA (1011bp) protein (337aa)
Oligopeptide/dipeptide ABC transporter ATP-binding protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTJ1_HALBP
oligopeptide/dipeptide ABC transporter ATP-binding protein
Oligopeptide/dipeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELY23092.1}; Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ADQ65936.1}; TaxID=469382 specie
qh_3_scaffold_2160_14
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(11269..11826)
DNA (558bp) protein (186aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTJ0_HALBP
dipeptide/oligopeptide/nickel ABC transporter permease
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:ADQ65935.1}; Dipeptide/oligopeptide/nickel ABC transporter permease {ECO:0000313|EMBL:ELY23091.1}; TaxID=4
Displaying 14 items

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