ggKbase home page

qh_3_scaffold_289

Search features with annotation key words

Displaying items 1-30 of 37 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_3_scaffold_289_1
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

92..238
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MAC0_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA42298.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
qh_3_scaffold_289_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

636..908
DNA (273bp) protein (91aa)
Transcriptional regulator PadR family protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR93_9EURY
Transcriptional regulator PadR family protein {ECO:0000313|EMBL:ELZ24912.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halos
putative transcriptional regulator
qh_3_scaffold_289_3
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1193..1450)
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Archaea RepID=U1NRW4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH00306.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
hypothetical protein
qh_3_scaffold_289_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1650..2129
DNA (480bp) protein (160aa)
Thioredoxin n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CMX5_9EURY
Thioredoxin {ECO:0000313|EMBL:ELZ23757.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
trxA7; thioredoxin
qh_3_scaffold_289_5
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2289..2774
DNA (486bp) protein (162aa)
Universal stress protein UspA n=1 Tax=haloarchaeon 3A1_DGR RepID=T0U2Y3_9EURY
Putative universal stress protein {ECO:0000313|EMBL:CQR50015.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;
UspA domain-containing protein
qh_3_scaffold_289_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2808..3248)
DNA (441bp) protein (147aa)
YbaK domain protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y387_NATM8
ybaK; YbaK domain protein
YbaK domain protein {ECO:0000313|EMBL:CCQ36972.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (stra
qh_3_scaffold_289_7
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3321..3824
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1PD06_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG89976.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
qh_3_scaffold_289_8
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3887..4060)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MVI7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49606.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
qh_3_scaffold_289_9
unknown

Not on your lists

4292..4396
DNA (105bp) protein (35aa)

This feature has no annotations

qh_3_scaffold_289_10
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4485..5057
DNA (573bp) protein (191aa)
DNA-binding ferritin-like protein (Oxidative damage protectant) n=2 Tax=Halobacteriaceae RepID=L0JNS0_NATP1
DNA-binding ferritin-like protein (oxidative damage protectant)
Ferritin Dps family protein {ECO:0000313|EMBL:ELZ15039.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolera
qh_3_scaffold_289_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5266..5442)
DNA (177bp) protein (59aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA45383.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
qh_3_scaffold_289_12
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5618..6310)
DNA (693bp) protein (231aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSN3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92442.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qh_3_scaffold_289_13
Natrinema sp. J7-2, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6475..6954)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Natrinema sp. (strain J7-2) RepID=I7BZY0_NATSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFO58610.1}; TaxID=406552 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema sp. (strain J7-2).;"
qh_3_scaffold_289_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6954..8102)
DNA (1149bp) protein (383aa)
Acetyl-CoA acetyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYP6_9EURY
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EMA50438.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
acetyl-CoA acetyltransferase
qh_3_scaffold_289_15
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8342..9484
DNA (1143bp) protein (381aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16)
3-ketoacyl-CoA thiolase n=2 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=L9VYG2_HALJB
3-ketoacyl-CoA thiolase {ECO:0000313|EMBL:ELY41298.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qh_3_scaffold_289_16
unknown

Not on your lists

comp(9999..10184)
DNA (186bp) protein (62aa)

This feature has no annotations

qh_3_scaffold_289_17
unknown

Not on your lists

comp(10219..10611)
DNA (393bp) protein (131aa)

This feature has no annotations

qh_3_scaffold_289_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10655..10996
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9G2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55281.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qh_3_scaffold_289_19
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11242..12237)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J779_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ13974.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qh_3_scaffold_289_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12351..12851)
DNA (501bp) protein (167aa)
PHP domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N646_9EURY
PHP domain-containing protein {ECO:0000313|EMBL:EMA53407.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
histidinol phosphatase
qh_3_scaffold_289_21
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13028..13939)
DNA (912bp) protein (304aa)
Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K8I9_9EURY
Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase {ECO:0000313|EMBL:EMA16160.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase
qh_3_scaffold_289_22
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14110..15840
DNA (1731bp) protein (577aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QNE0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93935.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qh_3_scaffold_289_23
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15948..16994)
DNA (1047bp) protein (349aa)
Brp-like protein n=2 Tax=Haloarcula hispanica RepID=G0HYF5_HALHT
blh; brp-like protein
Brp-like protein {ECO:0000313|EMBL:AEM58147.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain ATCC 3
qh_3_scaffold_289_24
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16991..17773)
DNA (783bp) protein (261aa)
crtY; lycopene cyclase (EC:1.14.-.-)
Lycopene beta-cyclase {ECO:0000313|EMBL:CAJ51148.1}; EC=5.5.1.19 {ECO:0000313|EMBL:CAJ51148.1};; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratu
Lycopene cyclase domain protein n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1N1D5_9EURY
qh_3_scaffold_289_25
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17958..20171
DNA (2214bp) protein (738aa)
Bacterio-opsin activator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D066_9EURY
Bacterio-opsin activator {ECO:0000313|EMBL:ELZ28901.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2
bat; receiver/sensor/bat box HTH-10 family transcription regulator Bat (homolog to bacterioopsin activator)
qh_3_scaffold_289_26
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20274..21089
DNA (816bp) protein (272aa)
Cruxrhodopsin n=2 Tax=Haloarcula japonica RepID=Q9YGB7_HALJP
Cruxrhodopsin {ECO:0000313|EMBL:BAA81816.1}; Flags: Precursor;; TaxID=29282 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica.
rhodopsin
qh_3_scaffold_289_27
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21337..21966
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZC32_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY83561.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
hypothetical protein
qh_3_scaffold_289_28

Not on your lists

22089..22718
DNA (630bp) protein (210aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZJ90_9ARCH
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:ESS02340.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
hypothetical protein
qh_3_scaffold_289_29
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22799..23224)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L149_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA27287.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
putative ester cyclase
qh_3_scaffold_289_30
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23500..24300
DNA (801bp) protein (267aa)
Uncharacterized protein n=2 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L9YWD6_NATP1
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AGB31847.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (s
Displaying items 1-30 of 37 in total

View Taxonomy