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qh_3_scaffold_327

Search features with annotation key words

Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_3_scaffold_327_1
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..222
DNA (222bp) protein (74aa)
NADH dehydrogenase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M7I9_HALMO
NADH dehydrogenase {ECO:0000313|EMBL:EMA40340.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
nadh dehydrogenase
qh_3_scaffold_327_2
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(319..708)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DDA8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ33450.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
qh_3_scaffold_327_3
unknown

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comp(815..1147)
DNA (333bp) protein (111aa)

This feature has no annotations

qh_3_scaffold_327_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1266..1748)
DNA (483bp) protein (161aa)
Cytochrome aa3 controlling protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M1N9_9EURY
Cytochrome aa3 controlling protein {ECO:0000313|EMBL:EMA39747.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamel
ccp; cytochrome aa3 controlling protein
qh_3_scaffold_327_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1920..2690
DNA (771bp) protein (257aa)
Bifunctional malic enzyme oxidoreductase/phosphotransacetylase {ECO:0000313|EMBL:EMA50979.1}; EC=1.1.1.40 {ECO:0000313|EMBL:EMA50979.1};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; H
mdh_2; malic enzyme (EC:1.1.1.40)
Bifunctional malic enzyme oxidoreductase/phosphotransacetylase n=2 Tax=Halococcus RepID=M0N1J6_9EURY
qh_3_scaffold_327_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2638..4068
DNA (1431bp) protein (477aa)
maeB2; malate dehydrogenase (oxaloacetate-decarboxylating) (EC:1.1.1.40)
Malate dehydrogenase (Oxaloacetate-decarboxylating) {ECO:0000313|EMBL:CCQ37285.1}; EC=1.1.1.40 {ECO:0000313|EMBL:CCQ37285.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacterial
Malate dehydrogenase (Oxaloacetate-decarboxylating) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSH3_NATM8
qh_3_scaffold_327_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4073..4273)
DNA (201bp) protein (67aa)
Small CPxCG-related zinc finger protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XMV9_NATM8
small CPxCG-related zinc finger protein
Small CPxCG-related zinc finger protein {ECO:0000313|EMBL:CCQ35222.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomon
qh_3_scaffold_327_8
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4383..4790
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LRZ8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36251.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qh_3_scaffold_327_9
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4787..4978
DNA (192bp) protein (64aa)
Transcription regulator-like protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0ELX7_9EURY
Transcription regulator-like protein {ECO:0000313|EMBL:ELZ47897.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriens
hypothetical protein
qh_3_scaffold_327_10
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(5034..5963)
DNA (930bp) protein (310aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818, ECO:0000313|EMBL:ELY64623.1}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {E
Ribonuclease Z n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XVI0_9EURY
ribonuclease Z
qh_3_scaffold_327_11
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6052..7101
DNA (1050bp) protein (350aa)
Replication factor C n=1 Tax=Halobacterium sp. DL1 RepID=G4IBQ3_9EURY
ATPase AAA {ECO:0000313|EMBL:AHG02583.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
rfcC; replication factor C small subunit 2
qh_3_scaffold_327_12
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7272..8645)
DNA (1374bp) protein (458aa)
Hydantoinase/carbamoylase family amidase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LSG7_9EURY
Hydantoinase/carbamoylase family amidase {ECO:0000313|EMBL:EMA36083.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma laci
amidase, hydantoinase/carbamoylase family protein
qh_3_scaffold_327_13
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8874..9239)
DNA (366bp) protein (122aa)
Uncharacterized protein n=8 Tax=Pseudomonas syringae pv. actinidiae RepID=S6KT32_PSESF
Uncharacterized protein {ECO:0000313|EMBL:EPM65190.1}; TaxID=1104682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" sou
antibiotic biosynthesis monooxygenase
qh_3_scaffold_327_14
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9497..10261)
DNA (765bp) protein (255aa)
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {
psmB; proteasome subunit beta (EC:3.4.25.1)
Proteasome subunit beta n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M435_HALMO
qh_3_scaffold_327_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10258..11007)
DNA (750bp) protein (250aa)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
psmA; proteasome alpha subunit (EC:3.4.25.1)
Proteasome subunit alpha n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJT1_9EURY
qh_3_scaffold_327_16

Not on your lists

11284..12180
DNA (897bp) protein (299aa)
uvsE; UV damage endonuclease (EC:3.-.-.-)
UV-damage endonuclease n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y6V2_9ARCH
UV-damage endonuclease {ECO:0000313|EMBL:ESS08491.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
qh_3_scaffold_327_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12300..12644
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D034_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ28830.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_3_scaffold_327_18
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12641..13030
DNA (390bp) protein (130aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N212_9EURY
putative nucleic acid-binding protein, contains PIN domain
qh_3_scaffold_327_19
unknown

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comp(13509..14639)
DNA (1131bp) protein (377aa)

This feature has no annotations

qh_3_scaffold_327_20
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(15255..15617)
DNA (363bp) protein (121aa)
Zinc finger SWIM domain-containing protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LXD9_9EURY
Zinc finger SWIM domain-containing protein {ECO:0000313|EMBL:EMA38111.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
hypothetical protein
qh_3_scaffold_327_21
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15688..16722)
DNA (1035bp) protein (345aa)
DNA repair and recombination protein RadA n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N861_9EURY
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
radA; DNA repair and recombination protein RadA
qh_3_scaffold_327_22
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16817..17434
DNA (618bp) protein (206aa)
DNA binding protein putative transcriptional regulator n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MVN8_9EURY
DNA binding protein putative transcriptional regulator {ECO:0000313|EMBL:EMA49666.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
acrR; DNA binding protein putative transcriptional regulator
qh_3_scaffold_327_23
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17431..18732
DNA (1302bp) protein (434aa)
Putative MFS transporter n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D2V6_9EURY
Putative MFS transporter {ECO:0000313|EMBL:ELZ29790.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
putative MFS transporter
qh_3_scaffold_327_24
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18734..19618
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IIG4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG03001.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
qh_3_scaffold_327_25
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19988..20236
DNA (249bp) protein (83aa)
Ribbon-helix-helix, copG family, UPF0175 family protein {ECO:0000313|EMBL:ERG96743.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" sour
qh_3_scaffold_327_26
unknown

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20237..20590
DNA (354bp) protein (118aa)

This feature has no annotations

qh_3_scaffold_327_27
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(20553..21584)
DNA (1032bp) protein (344aa)
Serine protease halolysin R4 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NCC9_9EURY
Serine protease halolysin R4 {ECO:0000313|EMBL:EMA54335.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandens
hypothetical protein
qh_3_scaffold_327_28
unknown

Not on your lists

22076..22573
DNA (498bp) protein (166aa)

This feature has no annotations

qh_3_scaffold_327_29
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(23081..24322)
DNA (1242bp) protein (414aa)
Glycosyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MY76_9EURY
Glycosyltransferase {ECO:0000313|EMBL:EMA50531.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989
glycosyltransferase
qh_3_scaffold_327_30
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24510..26174)
DNA (1665bp) protein (555aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MW40_9EURY
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:EMA49508.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source=
type I phosphodiesterase/nucleotide pyrophosphatase
Displaying items 1-30 of 31 in total

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