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qh_3_scaffold_354

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_3_scaffold_354_1

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3..707
DNA (705bp) protein (235aa)
2-haloalkanoic acid dehalogenase, type II n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y3J4_9ARCH
2-haloalkanoic acid dehalogenase, type II {ECO:0000313|EMBL:ESS05587.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
haloacid dehalogenase, type II
qh_3_scaffold_354_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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822..1247
DNA (426bp) protein (142aa)
Histidine triad protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDP2_9EURY
Histidine triad protein {ECO:0000313|EMBL:EMA43866.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
histidine triad (HIT) protein
qh_3_scaffold_354_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1377..2243
DNA (867bp) protein (289aa)
Transcription initiation factor IIB n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAB5_9EURY
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
transcription initiation factor iib (tfiib)
qh_3_scaffold_354_4
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2413..4506)
DNA (2094bp) protein (698aa)
MCM family protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N8X7_9EURY
MCM family protein {ECO:0000313|EMBL:EMA53105.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 135
MCM family protein
qh_3_scaffold_354_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4615..5400)
DNA (786bp) protein (262aa)
cyoC; cytochrome c oxidase polypeptide III (EC:1.9.3.1)
Cox-type terminal oxidase subunit III n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEQ4_9EURY
Cox-type terminal oxidase subunit III {ECO:0000313|EMBL:EMA44206.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
qh_3_scaffold_354_6
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5525..5818
DNA (294bp) protein (98aa)
DNA-binding protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LH01_HALJP
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:AJF24636.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
qh_3_scaffold_354_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5949..6242)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCV3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54919.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_3_scaffold_354_trna_1
unknown

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6422..6494
DNA (73bp)
transferRNA
qh_3_scaffold_354_8
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6773..7780)
DNA (1008bp) protein (336aa)
mRNA 3'-end processing factor n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WWR2_9EURY
mRNA 3'-end processing factor {ECO:0000313|EMBL:ELY53919.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolytic
hypothetical protein rbh
qh_3_scaffold_354_9
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(7947..9800)
DNA (1854bp) protein (618aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617};; Polydeoxyribonucleotide synthase [ATP] {ECO:0
DNA ligase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WXK5_9EURY
ATP-dependent DNA ligase i
qh_3_scaffold_354_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9960..10841)
DNA (882bp) protein (294aa)
Cytochrome c oxidase subunit II n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFQ3_9EURY
Cytochrome c oxidase subunit II {ECO:0000313|EMBL:EMA44208.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharo
cytochrome c oxidase subunit II
qh_3_scaffold_354_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10986..12440
DNA (1455bp) protein (485aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:00
Protoheme IX farnesyltransferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHN1_9EURY
protoheme IX farnesyltransferase
qh_3_scaffold_354_12
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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12531..12962
DNA (432bp) protein (144aa)
Ntp pyrophosphohydrolase n=1 Tax=Halogranum salarium B-1 RepID=J2ZL60_9EURY
Ntp pyrophosphohydrolase {ECO:0000313|EMBL:EJN61480.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
NUDIX hydrolase
qh_3_scaffold_354_13
unknown

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comp(12967..13095)
DNA (129bp) protein (43aa)

This feature has no annotations

qh_3_scaffold_354_14
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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13322..13732
DNA (411bp) protein (137aa)
Prefoldin subunit beta n=1 Tax=Natronococcus occultus SP4 RepID=L0JWZ4_9EURY
prefoldin, beta subunit, archaeal
Prefoldin subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; GimC subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae;
qh_3_scaffold_354_15
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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13739..14035
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=M0A3T6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY92532.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.;"
hypothetical protein
qh_3_scaffold_354_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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14110..15222
DNA (1113bp) protein (371aa)
cellulase (EC:3.2.1.4)
Peptidase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MY40_9EURY
Peptidase {ECO:0000313|EMBL:EMA50642.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
qh_3_scaffold_354_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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15499..16503
DNA (1005bp) protein (335aa)
ABC transporter ATP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ME56_9EURY
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA44037.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
multidrug ABC transporter ATPase
qh_3_scaffold_354_18
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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16571..17098
DNA (528bp) protein (176aa)
ABC transporter n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MA12_9EURY
ABC transporter {ECO:0000313|EMBL:EMA41464.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
ABC transporter permease
Displaying 19 items

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