ggKbase home page

qh_3_scaffold_406

Search features with annotation key words

Displaying 21 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_3_scaffold_406_1

Not on your lists

comp(3..440)
DNA (438bp) protein (146aa)
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000313|EMBL:AEN07014.1}; EC=5.4.3.8 {ECO:0000313|EMBL:AEN07014.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=halophilic archaeon DL31 RepID=G2MNN6_9ARCH
qh_3_scaffold_406_2
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

524..769
DNA (246bp) protein (82aa)
mandelate racemase/muconate lactonizing protein id=24613559 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ESP90192.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" s
mandelate racemase
qh_3_scaffold_406_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1060..1527)
DNA (468bp) protein (156aa)
Protein-tyrosine phosphatase, low molecular weight n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGS6_9EURY
Protein-tyrosine phosphatase, low molecular weight {ECO:0000313|EMBL:EMA44932.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
protein-tyrosine-phosphatase
qh_3_scaffold_406_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1541..2704)
DNA (1164bp) protein (388aa)
Arsenical-resistance protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZZ9_9EURY
Arsenical-resistance protein {ECO:0000313|EMBL:EMA37705.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensi
arsenical-resistance protein
qh_3_scaffold_406_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2697..3095)
DNA (399bp) protein (133aa)
Transcriptional regulator, ArsR family protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJM9_9EURY
Transcriptional regulator, ArsR family protein {ECO:0000313|EMBL:EMA44934.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
regulatory protein ArsR
qh_3_scaffold_406_6
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3479..3655
DNA (177bp) protein (59aa)
Endoribonuclease L-PSP n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NFC6_9EURY
Endoribonuclease L-PSP {ECO:0000313|EMBL:EMA56677.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM
putative translation initiation inhibitor, yjgF family
qh_3_scaffold_406_7
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3787..4746)
DNA (960bp) protein (320aa)
Permease n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NCB3_9EURY
Permease {ECO:0000313|EMBL:EMA55213.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552.;"
permease
qh_3_scaffold_406_8
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4748..5131)
DNA (384bp) protein (128aa)
ArsR family transcriptional regulator n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NDP7_9EURY
ArsR family transcriptional regulator {ECO:0000313|EMBL:EMA55214.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus th
putative transcriptional regulator
qh_3_scaffold_406_9
unknown

Not on your lists

comp(5606..5956)
DNA (351bp) protein (117aa)

This feature has no annotations

qh_3_scaffold_406_10
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6327..7151)
DNA (825bp) protein (275aa)
Transposase IS4 family protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MT89_9EURY
Transposase IS4 family protein {ECO:0000313|EMBL:EMA48538.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailande
ISH9-type transposase
qh_3_scaffold_406_11
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7304..8101)
DNA (798bp) protein (266aa)
hypothetical protein id=24613286 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP90222.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qh_3_scaffold_406_12
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8765..9928
DNA (1164bp) protein (388aa)
ABC transporter phosphonate-binding protein n=2 Tax=Haloarcula hispanica RepID=G0HZ14_HALHT
phosphate ABC transporter substrate-binding protein
ABC transporter phosphonate-binding protein {ECO:0000313|EMBL:AEM59065.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcu
qh_3_scaffold_406_13
Haloferax sp. ATCC BAA-646, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9979..10812
DNA (834bp) protein (278aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=1227464 species="Archaea; Euryarchaeota; Halobacteria; Haloferacal
Phosphonate ABC transporter ATPase n=3 Tax=Haloferax RepID=M0FIC4_9EURY
phnC2; phosphonates ABC transporter ATP-binding protein
qh_3_scaffold_406_14
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10814..11626
DNA (813bp) protein (271aa)
Phosphonates ABC transporter permease protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0K9N2_HALAR
Phosphonates ABC transporter permease protein {ECO:0000313|EMBL:EMA17921.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloa
phnE; phosphonates ABC transporter permease protein
qh_3_scaffold_406_15
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11623..12414
DNA (792bp) protein (264aa)
Phosphonates ABC transporter permease protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IJW6_9EURY
Phosphonates ABC transporter permease protein {ECO:0000313|EMBL:ELZ97020.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax m
phnD2; phosphonates ABC transporter permease protein
qh_3_scaffold_406_16
unknown

Not on your lists

comp(12411..12533)
DNA (123bp) protein (41aa)

This feature has no annotations

qh_3_scaffold_406_17
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13467..13652
DNA (186bp) protein (62aa)
Transposase IS4 family protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N367_9EURY
Transposase IS4 family protein {ECO:0000313|EMBL:EMA55846.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailande
transposase IS4 family protein
qh_3_scaffold_406_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13838..14779
DNA (942bp) protein (314aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC63_9EURY
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:EMA54270.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
hypothetical protein
qh_3_scaffold_406_19
unknown

Not on your lists

comp(14792..14941)
DNA (150bp) protein (50aa)

This feature has no annotations

qh_3_scaffold_406_20
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14911..16113)
DNA (1203bp) protein (401aa)
L-alanine-DL-glutamate epimerase related enzymes of enolase superfamily n=1 Tax=Haloquadratum sp. J07HQX50 RepID=U1N9Z7_9EURY
L-alanine-DL-glutamate epimerase related enzymes of enolase superfamily {ECO:0000313|EMBL:ERG99954.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloq
galactonate dehydratase
qh_3_scaffold_406_21
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16234..17124)
DNA (891bp) protein (297aa)
Xylose dehydrogenase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IXX6_HALVA
Xylose dehydrogenase {ECO:0000313|EMBL:EMA00634.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 29
glucose-fructose oxidoreductase
Displaying 21 items

View Taxonomy