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qh_3_scaffold_540_13

Organism: QH_3_Halobacteriales_64_13

near complete RP 33 / 55 MC: 4 BSCG 28 / 51 MC: 2 ASCG 36 / 38 MC: 3
Location: comp(10672..11643)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7V0_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 326.0
  • Bit_score: 560
  • Evalue 1.30e-156
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 326.0
  • Bit_score: 560
  • Evalue 1.90e-156
transcription initiation factor TFB similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 326.0
  • Bit_score: 553
  • Evalue 4.60e-155

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 972
ATGTGCCTGCACTACTACTATTTAAGTGCAATGACACGGCCTACCCGTCAGCGCGAGCGCGAGCGTCAACAAGGGGGTTCAGCGGGAGAACGGGAGCAGGAGCAGAACGAAGGGGTACGTGACTGTCCGGAGTGCGAGTCGAAGAACCTCGTCAAGAGTTCCGACCGTGGCGAACTCGTCTGTGAGGACTGTGGCCTCGTCGTCGAGGAAGGGTCGATCGACCCGGGACCGGAGTGGCGTGCCTTCAATCACTCCGAACGCCAGCAGAAGTCCCGAGTTGGTGCGCCGACTACCCAGACGATGCACGATAAGGGTCTCACCACGACGATCTCGAAGAAACGCTCCCAGATGCATCGATTACGGAAATGGCAGGAACGCATCCGCACGAAGGACGCCGGCGAACGCAACCTCCAGTTCGCGCTCTCGGAGATCGATCGGATGGCCTCTGCCCTGGGTGTTCCCCGCTCGGTCCGGGAGGTCGCCTCGGTCATCTATCGCCGGGCGCTCGCCGACGACCTCATCCGTGGCCGCTCTATCGAAGGAGTTGCGACCTCCGCGCTCTACGCTGCCTGCCGGAAGGAAGGCATCCCGCGCTCGCTCGAGGAGATCTCGGAGGTCTCCCGGGTCGAACGCAAGGAGATCGGCCGTACGTATCGGTATATCTCACAGGAACTCGGCCTCGAGATGCGTCCCGTCGACCCGAAGAAATACGTCCCCCGTTTCTGTTCGGAACTCACCCTGTCCGAGGAAGTCCAGTCGAAGGCCAACGACATCATCGAGACCACCGCCGAGGAAGGCCTCCTCTCGGGCAAATCCCCGACCGGCTACGCCGCCGCCGCGATCTACGCCGCTTCCCTGCTCTGTAACGAGAAAAAGACCCAACGCGAGGTCGCCGACGTCGCCCAGGTAACTGAAGTCACCATCCGCAATCGCTACCAGGAACAGATCGAGGCGATGGGCATCCATAGCTGA
PROTEIN sequence
Length: 324
MCLHYYYLSAMTRPTRQRERERQQGGSAGEREQEQNEGVRDCPECESKNLVKSSDRGELVCEDCGLVVEEGSIDPGPEWRAFNHSERQQKSRVGAPTTQTMHDKGLTTTISKKRSQMHRLRKWQERIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALADDLIRGRSIEGVATSALYAACRKEGIPRSLEEISEVSRVERKEIGRTYRYISQELGLEMRPVDPKKYVPRFCSELTLSEEVQSKANDIIETTAEEGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADVAQVTEVTIRNRYQEQIEAMGIHS*