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qh_3_scaffold_540

Search features with annotation key words

Displaying 20 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_3_scaffold_540_1
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..1009)
DNA (1008bp) protein (336aa)
50S ribosomal protein L10 n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M4H1_HALMO
rplP0; acidic ribosomal protein P0
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000256|HAMAP-Rule:MF_00280}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobact
qh_3_scaffold_540_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1009..1647)
DNA (639bp) protein (213aa)
50S ribosomal protein L1 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHL1_9EURY
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318, ECO:0000256|SAAS:SAAS00010815}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
50S ribosomal protein L10Ae (L1p)
qh_3_scaffold_540_3

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1906..2589
DNA (684bp) protein (228aa)
Haloacid dehalogenase family protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4XQ80_9ARCH
Haloacid dehalogenase family protein {ECO:0000313|EMBL:ESS10629.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
HAD-superfamily hydrolase, subfamily IA variant 1
qh_3_scaffold_540_4
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2710..3222)
DNA (513bp) protein (171aa)
50S ribosomal protein L11 n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GP58_9EURY
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus
rplK; 50S ribosomal protein L11
qh_3_scaffold_540_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3773..4393
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDF9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55896.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_3_scaffold_540_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4488..5075
DNA (588bp) protein (196aa)
CAAX amino terminal protease family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NGV3_9EURY
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EMA55895.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococ
CAAX amino terminal protease family protein
qh_3_scaffold_540_7
unknown

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comp(5348..5674)
DNA (327bp) protein (109aa)

This feature has no annotations

qh_3_scaffold_540_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5715..6824)
DNA (1110bp) protein (370aa)
Potassium channel-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0QTB0_9EURY
Potassium channel-like protein {ECO:0000313|EMBL:EMA52696.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
Kef-type K+ ransport system NAD-binding protein
qh_3_scaffold_540_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7055..8098
DNA (1044bp) protein (348aa)
Glycine betaine transporter BetL n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQB1_9EURY
Glycine betaine transporter BetL {ECO:0000313|EMBL:EMA47917.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacchar
choline-glycine betaine transporter
qh_3_scaffold_540_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8098..8880
DNA (783bp) protein (261aa)
Glycine betaine transporter BetL n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7P6_9EURY
Glycine betaine transporter BetL {ECO:0000313|EMBL:EMA52695.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifod
glycine/betaine ABC transporter
qh_3_scaffold_540_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8959..9633)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6T8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53637.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_3_scaffold_540_12
unknown

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comp(10272..10541)
DNA (270bp) protein (90aa)

This feature has no annotations

qh_3_scaffold_540_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10672..11643)
DNA (972bp) protein (324aa)
Transcription initiation factor IIB n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7V0_9EURY
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
transcription initiation factor TFB
qh_3_scaffold_540_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11756..12373
DNA (618bp) protein (206aa)
Ribonuclease H n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N962_9EURY
Ribonuclease H {ECO:0000313|EMBL:EMA53639.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
ribonuclease H
qh_3_scaffold_540_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12366..13121
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAG1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53640.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_3_scaffold_540_16
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13217..13576)
DNA (360bp) protein (120aa)
Transcriptional regulator n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HI19_9EURY
Transcriptional regulator {ECO:0000313|EMBL:ELZ83438.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC 33959
transcriptional regulator
qh_3_scaffold_540_17
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13823..14356
DNA (534bp) protein (178aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=662476 species="Arc
ipp; inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JY31_9EURY
qh_3_scaffold_540_18
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15971..16402
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HY62_HALHT
Uncharacterized protein {ECO:0000313|EMBL:EMA13814.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
hypothetical protein
qh_3_scaffold_540_19
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16404..17459
DNA (1056bp) protein (352aa)
Integrase family protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZ13_9EURY
Integrase family protein {ECO:0000313|EMBL:EFW90429.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophi
XerC/D-like integrase
qh_3_scaffold_540_20
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17928..18362)
DNA (435bp) protein (145aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KT82_9EURY
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AHB65827.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;"
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