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qh_3_scaffold_110

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_3_scaffold_110_1
unknown

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3..218
DNA (216bp) protein (72aa)

This feature has no annotations

qh_3_scaffold_110_2
RBG_16_Archaea_50_20_curated, Archaea

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656..1690
DNA (1035bp) protein (345aa)
pyridoxal-5'-phosphate-dependent protein subunit beta (EC:2.5.1.47); K01738 cysteine synthase A [EC:2.5.1.47] Tax=RBG_16_Archaea_50_20_curated
cysteine synthase A (EC:2.5.1.47)
Cysteine synthase A n=2 Tax=Candidatus Caldiarchaeum subterraneum RepID=Q4LEC7_9ARCH
qh_3_scaffold_110_3
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1888..2574
DNA (687bp) protein (229aa)
IclR family transcriptional regulator n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WP68_9EURY
IclR family transcriptional regulator {ECO:0000313|EMBL:ELY50133.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnob
transcriptional regulator
qh_3_scaffold_110_4
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2635..4194)
DNA (1560bp) protein (520aa)
Aldehyde Dehydrogenase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPK4_9EURY
Aldehyde Dehydrogenase {ECO:0000313|EMBL:EFW93487.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilu
aldehyde dehydrogenase
qh_3_scaffold_110_5
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4366..5496
DNA (1131bp) protein (377aa)
Dehydrogenase E1 component n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WU64_9EURY
Dehydrogenase E1 component {ECO:0000313|EMBL:ELY52751.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit
qh_3_scaffold_110_6
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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5493..6491
DNA (999bp) protein (333aa)
Transketolase n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CKV6_9EURY
Transketolase {ECO:0000313|EMBL:ELZ23920.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 13563.;"
transketolase
qh_3_scaffold_110_7
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6578..7351
DNA (774bp) protein (258aa)
3-ketoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EFW91344.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EFW91344.1};; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
3-ketoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QVT1_9EURY
3-ketoacyl-ACP reductase
qh_3_scaffold_110_8
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7838..9475)
DNA (1638bp) protein (546aa)
gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltransferase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPM2_9EURY
Gamma-glutamyltransferase {ECO:0000313|EMBL:EFW93505.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihaloph
qh_3_scaffold_110_9
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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9614..10357
DNA (744bp) protein (248aa)
Amidohydrolase 2 n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARN6_RUBXD
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:ABG05942.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter x
qh_3_scaffold_110_10
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10612..11082
DNA (471bp) protein (157aa)
CMP/dCMP deaminase zinc-binding n=1 Tax=Halobacterium sp. DL1 RepID=G4IAI7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG02737.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
cytidine deaminase
qh_3_scaffold_110_11
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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11289..12899
DNA (1611bp) protein (537aa)
Extracellular solute-binding protein family 1 n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DD71_HALXS
extracellular solute-binding protein family 1
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:AEH38959.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xan
qh_3_scaffold_110_12
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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12922..13893
DNA (972bp) protein (324aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DDZ9_HALXS
ABC transporter integral membrane subunit
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEH38958.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger x
qh_3_scaffold_110_13
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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13897..14835
DNA (939bp) protein (313aa)
ABC transporter integral membrane subunit n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BYN1_9EURY
sugar ABC transporter permease
Sugar ABC transporter permease {ECO:0000313|EMBL:AHG01413.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii
qh_3_scaffold_110_14

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14911..16074
DNA (1164bp) protein (388aa)
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase n=1 Tax=halophilic archaeon DL31 RepID=G2MG86_9ARCH
acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:AEN05980.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qh_3_scaffold_110_15
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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16124..17104
DNA (981bp) protein (327aa)
Proline racemase n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0HVX0_9EURY
Proline racemase {ECO:0000313|EMBL:ELZ88760.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis ATCC BAA-897.;"
prr; proline racemase
qh_3_scaffold_110_16
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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17169..19688
DNA (2520bp) protein (840aa)
glycine cleavage system T protein (aminomethyltransferase) (EC:1.5.3.10)
Glycine cleavage system T protein (Aminomethyltransferase) {ECO:0000313|EMBL:AGB37230.1}; EC=1.5.3.10 {ECO:0000313|EMBL:AGB37230.1};; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natria
Glycine cleavage system protein T n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SPX4_9EURY
qh_3_scaffold_110_17
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(19806..21035)
DNA (1230bp) protein (410aa)
Dihydrolipoamide S-acetyltransferase {ECO:0000313|EMBL:AKH97375.1}; EC=2.3.1.12 {ECO:0000313|EMBL:AKH97375.1};; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
Branched-chain alpha-keto acid dehydrogenase subunit E2 n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LU57_9EURY
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component
qh_3_scaffold_110_18
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(21108..21815)
DNA (708bp) protein (236aa)
UPF0173 metal-dependent hydrolase MTH_1902 n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=Y1902_METTH
metal-dependent hydrolase
UPF0173 metal-dependent hydrolase MTH_1902 {ECO:0000255|HAMAP-Rule:MF_00457}; TaxID=187420 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacte
qh_3_scaffold_110_19
unknown

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comp(21847..21966)
DNA (120bp) protein (40aa)

This feature has no annotations

qh_3_scaffold_110_20
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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21987..25592
DNA (3606bp) protein (1202aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IV87_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF94436.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
qh_3_scaffold_110_21
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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25669..25935
DNA (267bp) protein (89aa)
IS240-type transposase (ISH102) n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FUA3_9EURY
IS240-type transposase (ISH102) {ECO:0000313|EMBL:ELZ62159.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium
IS240-type transposase (ISH102)
Displaying 21 items

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