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qh_3_scaffold_2411

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_3_scaffold_2411_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..761)
DNA (759bp) protein (253aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=797114 species="Archaea;
ligA; NAD-dependent DNA ligase LigA (EC:6.5.1.2)
NAD-dependent DNA ligase LigA n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CZ46_9EURY
qh_3_scaffold_2411_2
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(758..1063)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0L1N9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA27466.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
hypothetical protein
qh_3_scaffold_2411_3
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1250..1819)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JDA7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KDE57869.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
hypothetical protein
qh_3_scaffold_2411_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1816..2247)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IM72_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50787.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qh_3_scaffold_2411_5
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2283..2612)
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=Archaea RepID=B9LVJ2_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM58705.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
qh_3_scaffold_2411_6
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2619..2786)
DNA (168bp) protein (56aa)
Uncharacterized protein {ECO:0000313|EMBL:ELZ80273.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513
qh_3_scaffold_2411_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2835..3104)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWU6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27706.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_3_scaffold_2411_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3178..3474)
DNA (297bp) protein (99aa)
CopG family protein n=2 Tax=Natronomonas pharaonis RepID=Q3IM20_NATPD
CopG domain protein {ECO:0000313|EMBL:CAI50846.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
homolog to transcription regulator
qh_3_scaffold_2411_9
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3779..4882)
DNA (1104bp) protein (368aa)
Aspartate aminotransferase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KS16_HALAR
Aspartate aminotransferase {ECO:0000313|EMBL:EMA22535.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis
septum site-determining protein
qh_3_scaffold_2411_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5247..6155
DNA (909bp) protein (303aa)
tRNA (guanine(26)-N(2))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00290}; EC=2.1.1.216 {ECO:0000256|HAMAP-Rule:MF_00290};; tRNA 2,2-dimethylguanosine-26 methyltransferase {ECO:0000256|HAMAP-Rule:
trm1; N(2),N(2)-dimethylguanosine tRNA methyltransferase (EC:2.1.1.32)
tRNA (guanine(26)-N(2))-dimethyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D159_9EURY
qh_3_scaffold_2411_11

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6268..7449
DNA (1182bp) protein (394aa)
ABC transporter substrate-binding protein n=1 Tax=Halorubrum sp. T3 RepID=UPI000375E384
adsorption protein
Immunoglobulin I-set domain protein {ECO:0000313|EMBL:KKT80796.1}; TaxID=1618972 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_44_8b.;"
qh_3_scaffold_2411_12
unknown

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comp(7510..7848)
DNA (339bp) protein (113aa)

This feature has no annotations

Displaying 12 items

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