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qh_3_scaffold_372

Search features with annotation key words

Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_3_scaffold_372_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..1010)
DNA (1008bp) protein (336aa)
Aldehyde Dehydrogenase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MH64_9EURY
NAD-dependent aldehyde dehydrogenase
Aldehyde Dehydrogenase {ECO:0000313|EMBL:EMA45067.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus D
qh_3_scaffold_372_2
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1190..2017)
DNA (828bp) protein (276aa)
Proline dehydrogenase n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DQ02_9EURY
Proline dehydrogenase {ECO:0000313|EMBL:ELZ36234.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 1137
Proline dehydrogenase
qh_3_scaffold_372_3
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2022..2537)
DNA (516bp) protein (172aa)
Halocyanin domain protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0EXM2_9EURY
Halocyanin domain protein {ECO:0000313|EMBL:ELZ52536.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 7
halocyanin domain protein
qh_3_scaffold_372_4
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2751..6842
DNA (4092bp) protein (1364aa)
DNA topoisomerase VI subunit B {ECO:0000313|EMBL:CCQ32295.1}; EC=5.99.1.3 {ECO:0000313|EMBL:CCQ32295.1};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
DNA topoisomerase VI subunit B (EC:5.99.1.3)
DNA topoisomerase VI subunit B n=2 Tax=Halorhabdus tiamatea SARL4B RepID=S6D1B4_9EURY
qh_3_scaffold_372_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6860..7972
DNA (1113bp) protein (371aa)
DNA topoisomerase (EC:5.99.1.3); K03166 DNA topoisomerase VI subunit A [EC:5.99.1.3] id=24649819 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Type 2 DNA topoisomerase 6 subunit A {ECO:0000256|HAMAP-Rule:MF_00132}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00132};; Type II DNA topoisomerase VI subunit A {ECO:0000256|HAMAP-Rule:MF_00132}; TaxID=
DNA topoisomerase VI, subunit A
qh_3_scaffold_372_6
unknown

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8215..8358
DNA (144bp) protein (48aa)

This feature has no annotations

qh_3_scaffold_372_7
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8783..9334)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0DIZ2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ35425.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.
hypothetical protein
qh_3_scaffold_372_8
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9414..10151)
DNA (738bp) protein (246aa)
glnQ; ABC-type glutamine/glutamate/polar amino acids transport system, ATP-binding protein (EC:3.6.3.21)
ABC-type glutamine/glutamate/polar amino acids transport system, ATP-binding protein {ECO:0000313|EMBL:AFK20124.1}; EC=3.6.3.21 {ECO:0000313|EMBL:AFK20124.1};; Glutamine ABC transporter ATP-binding pr
ABC-type glutamine/glutamate/polar amino acids transport system, ATP-binding protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R7B4_HALMT
qh_3_scaffold_372_9
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10145..11110)
DNA (966bp) protein (322aa)
Amino acid ABC transporter membrane protein, paat family n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0EDY3_9EURY
Amino acid ABC transporter membrane protein, paat family {ECO:0000313|EMBL:ELZ45273.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source
ABC-type transport system permease protein (probable substrate glutamine/glutamate/polar amino acids)
qh_3_scaffold_372_10
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(11174..12139)
DNA (966bp) protein (322aa)
ABC-type glutamine/glutamate/polar amino acids transport system, substrate-binding protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DTV1_9EURY
ABC-type glutamine/glutamate/polar amino acids transport system, substrate-binding protein {ECO:0000313|EMBL:CDK38643.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Ha
ABC-type transport system periplasmic substrate-binding protein (probable substrate glutamine/glutamate/polar amino acids)
qh_3_scaffold_372_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12211..13065)
DNA (855bp) protein (285aa)
Putative Zn-dependent hydrolase n=1 Tax=halophilic archaeon J07HX64 RepID=U1P0Z1_9EURY
Putative Zn-dependent hydrolase {ECO:0000313|EMBL:ERH10270.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qh_3_scaffold_372_12
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13200..13526
DNA (327bp) protein (109aa)
hypothetical protein id=24654664 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Uncharacterized protein {ECO:0000313|EMBL:ERG89636.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
qh_3_scaffold_372_13
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13604..15430)
DNA (1827bp) protein (609aa)
ABC transporter related n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZ63_HALMD
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACV46749.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qh_3_scaffold_372_14
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15558..16604)
DNA (1047bp) protein (349aa)
purM; phosphoribosylaminoimidazole synthetase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
Phosphoribosylformylglycinamidine cyclo-ligase n=2 Tax=Haloarcula hispanica RepID=G0HY09_HALHT
qh_3_scaffold_372_15
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16779..16934)
DNA (156bp) protein (52aa)
Zn-dependent protease n=1 Tax=halophilic archaeon J07HX64 RepID=U1QU63_9EURY
Zn-dependent protease {ECO:0000313|EMBL:ERH09342.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
peptidase M50
qh_3_scaffold_372_16
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16922..17443)
DNA (522bp) protein (174aa)
Zn-dependent protease n=1 Tax=halophilic archaeon J07HX64 RepID=U1QU63_9EURY
Zn-dependent protease {ECO:0000313|EMBL:ERH09342.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
metallopeptidase
qh_3_scaffold_372_17
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17443..19020)
DNA (1578bp) protein (526aa)
TraB determinant protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1MYQ0_9EURY
TraB determinant protein {ECO:0000313|EMBL:ERG89158.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
TraB family protein
qh_3_scaffold_372_18
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19283..20590
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9VWP2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY41605.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidifaciens J
hypothetical protein
qh_3_scaffold_372_19
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20607..20825)
DNA (219bp) protein (73aa)
Uncharacterized protein {ECO:0000313|EMBL:KKF39337.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
qh_3_scaffold_372_20
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20822..21022)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0U4D2_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM57620.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
qh_3_scaffold_372_21
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21152..22615
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TYB0_9EURY
cell surface protein/lipoprotein
PQQ repeat protein {ECO:0000313|EMBL:CAI48627.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
qh_3_scaffold_372_22
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22820..25195
DNA (2376bp) protein (792aa)
Uncharacterized protein n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0NXG6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA61280.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 13561.;
hypothetical protein
qh_3_scaffold_372_23
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25367..25915
DNA (549bp) protein (183aa)
AraC family transcriptional regulator n=2 Tax=Haloarcula hispanica RepID=G0HTE2_HALHT
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:AJF25498.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp
qh_3_scaffold_372_24
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25982..26212
DNA (231bp) protein (77aa)
Topoisomerase DNA binding C4 zinc finger n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JJX0_HALVA
Topoisomerase DNA binding C4 zinc finger {ECO:0000313|EMBL:EMA08628.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
DNA topoisomerase I
Displaying 24 items

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