ggKbase home page

qh_3_scaffold_471

Search features with annotation key words

Displaying 14 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_3_scaffold_471_1
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..936)
DNA (936bp) protein (312aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GRX7_9EURY
Binding-protein-dependent transporters inner membrane component {ECO:0000313|EMBL:ESP87791.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatu
ABC transporter
qh_3_scaffold_471_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(953..1918)
DNA (966bp) protein (322aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MLM9_9EURY
Binding-protein-dependent transporters inner membrane component {ECO:0000313|EMBL:EMA46551.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcu
binding-protein-dependent transporters inner membrane component
qh_3_scaffold_471_3
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1938..2912)
DNA (975bp) protein (325aa)
ABC-type transport system periplasmic substrate-binding protein (Probable substrate dipeptide/oligopeptide/nickel) n=1 Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18KK7_HALWD
dppA; ABC-type dipeptide/oligopeptide/nickel transport system, substrate binding protein
ABC-type transport system periplasmic substrate-binding protein (Probable substrate dipeptide/oligopeptide) {ECO:0000313|EMBL:CAJ51439.1}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; H
qh_3_scaffold_471_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2909..3583)
DNA (675bp) protein (225aa)
ABC-type dipeptide/oligopeptide/nickel transport system, substrate binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MLJ5_9EURY
ABC-type dipeptide/oligopeptide/nickel transport system, substrate binding protein {ECO:0000313|EMBL:EMA46552.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
dppA; ABC-type dipeptide/oligopeptide/nickel transport system, substrate binding protein
qh_3_scaffold_471_5
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3725..4222
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4IWH3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP87537.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qh_3_scaffold_471_6
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(4353..4655)
DNA (303bp) protein (101aa)
nusG; transcription antitermination protein NusG id=24654889 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
nusG; transcription antitermination protein NusG
qh_3_scaffold_471_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4669..4842)
DNA (174bp) protein (58aa)
secE; protein translocase subunit SecE id=24644251 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1085028 species="Archaea; Euryarchaeo
secE; protein translocase subunit SecE
qh_3_scaffold_471_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5009..6172)
DNA (1164bp) protein (388aa)
Cell division protein FtsZ n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CW20_9EURY
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.
cell division protein FtsZ
qh_3_scaffold_471_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6500..7891)
DNA (1392bp) protein (464aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160314}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160312};; TaxID=1085028 species="Archa
hypothetical protein; K09716 hypothetical protein id=24644765 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
D-aminoacyl-tRNA deacylase
qh_3_scaffold_471_10
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7967..10102)
DNA (2136bp) protein (712aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4C3_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ13485.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qh_3_scaffold_471_11
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10135..11034)
DNA (900bp) protein (300aa)
Transcription factor TFIIB cyclin-related protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9X2B4_9EURY
Transcription factor TFIIB cyclin-related protein {ECO:0000313|EMBL:ELY55865.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="N
Transcription factor TFIIB cyclin-related protein
qh_3_scaffold_471_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11982..12584
DNA (603bp) protein (201aa)
Single-stranded-DNA-specific exonuclease RecJ1 {ECO:0000313|EMBL:CAI48192.1}; EC=3.1.-.- {ECO:0000313|EMBL:CAI48192.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
Single-stranded-DNA-specific exonuclease RecJ1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUI8_NATPD
recJ; single-stranded-DNA-specific exonuclease
qh_3_scaffold_471_13
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12608..13075)
DNA (468bp) protein (156aa)
Putative membrane protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AC24_NATGS
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AFZ71453.1}; Uncharacterized protein {ECO:0000313|EMBL:ELY66755.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae;
qh_3_scaffold_471_14
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13159..13848)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WGT8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY48476.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 106
hypothetical protein
Displaying 14 items

View Taxonomy