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qh_3_scaffold_718

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_3_scaffold_718_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..663
DNA (663bp) protein (221aa)
Putative metal-dependent membrane protease n=1 Tax=halophilic archaeon J07HX64 RepID=U1NXW1_9EURY
Putative metal-dependent membrane protease {ECO:0000313|EMBL:ERH09010.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qh_3_scaffold_718_2
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(582..1358)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F7P2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ54639.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
qh_3_scaffold_718_3
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1584..2381
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LHW3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA31580.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hypothetical protein
qh_3_scaffold_718_4
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3075..3590
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AKJ9_NATGS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ73570.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium gregoryi (s
qh_3_scaffold_718_5
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3647..4006)
DNA (360bp) protein (120aa)
ribosomal protein S10-like protein id=24655156 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
30S ribosomal protein S10
qh_3_scaffold_718_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4152..4586
DNA (435bp) protein (145aa)
NUDIX hydrolase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR08_9EURY
NUDIX hydrolase {ECO:0000313|EMBL:ELZ25695.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
NUDIX hydrolase
qh_3_scaffold_718_7
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4756..6096
DNA (1341bp) protein (447aa)
Amino acid transport protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P989_9EURY
Amino acid transport protein {ECO:0000313|EMBL:EMA66717.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 149
cat5; transport protein (probable substrate cationic amino acids)
qh_3_scaffold_718_8
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6093..6845)
DNA (753bp) protein (251aa)
UspA domain protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PA36_9EURY
UspA domain protein
UspA domain protein {ECO:0000313|EMBL:EMA66718.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
qh_3_scaffold_718_9
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6902..7585)
DNA (684bp) protein (228aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000313|EMBL:ELZ27303.1}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_0
endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXD3_9EURY
qh_3_scaffold_718_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7929..8687)
DNA (759bp) protein (253aa)
Putative transcriptional regulator n=1 Tax=halophilic archaeon J07HX64 RepID=U1QRV7_9EURY
Putative transcriptional regulator {ECO:0000313|EMBL:ERH09918.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
putative transcriptional regulator
qh_3_scaffold_718_11
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9239..9910
DNA (672bp) protein (224aa)
galE7; UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LD32_HALJP
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EMA30354.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
qh_3_scaffold_718_12
unknown

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comp(10034..10156)
DNA (123bp) protein (41aa)

This feature has no annotations

Displaying 12 items

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