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qh_3_scaffold_978

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_3_scaffold_978_1
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2..1318
DNA (1317bp) protein (439aa)
MATE efflux family protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L3G0_9EURY
MATE efflux family protein {ECO:0000313|EMBL:EMA28117.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
MATE efflux family protein
qh_3_scaffold_978_2
unknown

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comp(1724..2020)
DNA (297bp) protein (99aa)

This feature has no annotations

qh_3_scaffold_978_3
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2090..3556)
DNA (1467bp) protein (489aa)
tRNA-guanine(15) transglycosylase {ECO:0000256|HAMAP-Rule:MF_01634}; EC=2.4.2.48 {ECO:0000256|HAMAP-Rule:MF_01634};; 7-cyano-7-deazaguanine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01634}; A
tRNA-guanine(15) transglycosylase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IYG4_HALVA
tgt; 7-cyano-7-deazaguanine tRNA-ribosyltransferase
qh_3_scaffold_978_4
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3641..4099)
DNA (459bp) protein (153aa)
NUDIX hydrolase n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RX07_HALTV
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ADB59619.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strain ATCC 5
qh_3_scaffold_978_5
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4177..5439)
DNA (1263bp) protein (421aa)
FG-GAP repeat protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IF47_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG03616.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
qh_3_scaffold_978_6
unknown

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comp(5461..5637)
DNA (177bp) protein (59aa)

This feature has no annotations

qh_3_scaffold_978_7
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5634..6575)
DNA (942bp) protein (314aa)
Beta-carotene 15,15''-monooxygenase, Brp/Blh family n=1 Tax=halophilic archaeon J07HX5 RepID=U1P631_9EURY
Beta-carotene 15,15''-monooxygenase, Brp/Blh family {ECO:0000313|EMBL:ERG89007.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
brp_2; brp-like protein 2
qh_3_scaffold_978_8
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6572..7546)
DNA (975bp) protein (325aa)
Lycopene cyclase domain protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WS12_9EURY
Lycopene cyclase domain protein {ECO:0000313|EMBL:ELY52279.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense
lycopene cyclase domain protein
qh_3_scaffold_978_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7603..9582)
DNA (1980bp) protein (660aa)
bat; receiver/sensor/bat box HTH-10 family transcription regulator Bat (homolog to bacterioopsin activator) id=24646775 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
PAS sensor histidine kinase {ECO:0000313|EMBL:ERH10939.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
PAS domain-containing protein
qh_3_scaffold_978_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9670..9984)
DNA (315bp) protein (105aa)
hop; halorhodopsin; K04642 halorhodopsin id=24646773 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Bacteriorhodopsin {ECO:0000313|EMBL:ERH10937.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hop; halorhodopsin precursor
qh_3_scaffold_978_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9923..10441)
DNA (519bp) protein (173aa)
hop; halorhodopsin; K04642 halorhodopsin id=24646773 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Bacteriorhodopsin {ECO:0000313|EMBL:ERH10937.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hop; halorhodopsin
qh_3_scaffold_978_12
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10669..12006
DNA (1338bp) protein (446aa)
Potassium transporter peripheral membrane component n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0CXF1_9EURY
Potassium transporter peripheral membrane component {ECO:0000313|EMBL:ELZ27895.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Hal
trkA; potassium transporter peripheral membrane component
qh_3_scaffold_978_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12008..13516
DNA (1509bp) protein (503aa)
Trk-type transport system (Probable substrate potassium) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMW3_NATPD
tp29u2_1; Trk-type transport system ( substrate potassium) 1, subunit 2.1
Trk-type transport system (Probable substrate potassium) {ECO:0000313|EMBL:CAI50543.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" s
qh_3_scaffold_978_14
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13670..14995
DNA (1326bp) protein (442aa)
Cation transporter n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PFU5_9EURY
Cation transporter {ECO:0000313|EMBL:EMA68936.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560.;"
trkH1; Trk-type transport system (probable substrate potassium)
qh_3_scaffold_978_15
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15245..16942
DNA (1698bp) protein (566aa)
Ion channel pore / TrkA domain protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y4S4_NATM8
pchA3; ion channel pore / TrkA domain protein
Ion channel pore / TrkA domain protein {ECO:0000313|EMBL:CCQ37528.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomona
qh_3_scaffold_978_16
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17039..19282
DNA (2244bp) protein (748aa)
Amino acid permease-associated region n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E3U4_9EURY
Amino acid permease-associated region {ECO:0000313|EMBL:ELZ41019.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum califo
cat1; transport protein (probable substrate cationic amino acids)
Displaying 16 items

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