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qh_3_scaffold_107

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_3_scaffold_107_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1..1230)
DNA (1230bp) protein (410aa)
hypothetical protein
hypothetical protein; K09118 hypothetical protein id=24658169 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
UPF0182 protein SRM_02453 {ECO:0000256|HAMAP-Rule:MF_01600}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qh_3_scaffold_107_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1783..2034
DNA (252bp) protein (84aa)
hypothetical protein
hypothetical protein id=24658170 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25375.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_3_scaffold_107_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2201..2971
DNA (771bp) protein (257aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HBH1_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45861.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_3_scaffold_107_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3258..4265)
DNA (1008bp) protein (336aa)
SPFH domain-containing protein
hypothetical protein id=24658172 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
SPFH domain / Band 7 family protein {ECO:0000313|EMBL:ABC44036.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
qh_3_scaffold_107_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4323..5237)
DNA (915bp) protein (305aa)
hypothetical protein
hypothetical protein id=24658173 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
SPFH domain / Band 7 family protein {ECO:0000313|EMBL:ABC44648.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
qh_3_scaffold_107_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5291..5944)
DNA (654bp) protein (218aa)
hypothetical protein
hypothetical protein id=24658174 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25379.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_3_scaffold_107_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6027..6830
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBH5_SALRM
YfiH
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
qh_3_scaffold_107_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7347..9095)
DNA (1749bp) protein (583aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:ABC45534.1}; EC=3.1.-.- {ECO:0000313|EMBL:ABC45534.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBH7_SALRM
recJ; single-stranded-DNA-specific exonuclease RecJ
qh_3_scaffold_107_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9738..11162
DNA (1425bp) protein (475aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=309807 specie
Transcription termination factor Rho n=2 Tax=Salinibacter ruber RepID=Q2S0E2_SALRD
rho; transcription termination factor Rho
qh_3_scaffold_107_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11388..14636
DNA (3249bp) protein (1083aa)
MdsD protein, putative n=2 Tax=Salinibacter ruber RepID=D5HBH9_SALRM
MdsD protein, putative {ECO:0000313|EMBL:CBH25384.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
MdsD protein
qh_3_scaffold_107_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14775..15521
DNA (747bp) protein (249aa)
HAD-superfamily hydrolase
HAD-superfamily hydrolase; K11777 HAD superfamily phosphatase id=24658180 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
HAD superfamily (Subfamily IA) hydrolase {ECO:0000313|EMBL:CBH25385.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
qh_3_scaffold_107_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15660..16337)
DNA (678bp) protein (226aa)
NUDIX family hydrolase
NUDIX family hydrolase id=24658182 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Hydrolase, NUDIX family protein {ECO:0000313|EMBL:CBH25387.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
qh_3_scaffold_107_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16654..18282
DNA (1629bp) protein (543aa)
Sulphate transporter n=2 Tax=Salinibacter ruber RepID=D5HBI3_SALRM
sul1; sulfate transporter
Sulfate transporter {ECO:0000313|EMBL:ABC46134.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
qh_3_scaffold_107_14
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

18430..18837
DNA (408bp) protein (136aa)
Tax=CG_Nitrosp_02
qh_3_scaffold_107_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18893..19567)
DNA (675bp) protein (225aa)
hypothetical protein
hypothetical protein id=24658184 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25390.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_3_scaffold_107_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20765..21259
DNA (495bp) protein (165aa)
hypothetical protein
hypothetical protein id=24658185 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44853.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_3_scaffold_107_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21297..21575)
DNA (279bp) protein (93aa)
hypothetical protein
hypothetical protein id=24658186 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25391.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_3_scaffold_107_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21771..23066
DNA (1296bp) protein (432aa)
Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain
Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain id=24658187 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain {ECO:0000313|EMBL:CBH25392.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sed
qh_3_scaffold_107_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23027..24208
DNA (1182bp) protein (394aa)
Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain
Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain {ECO:0000313|EMBL:CBH25392.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sed
Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain id=24658187 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qh_3_scaffold_107_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24265..24543)
DNA (279bp) protein (93aa)
AsnC family transcriptional regulator
AsnC family transcriptional regulator id=24658188 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:CBH25393.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
qh_3_scaffold_107_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24645..24947
DNA (303bp) protein (101aa)
GIY-YIG catalytic domain-containing protein
GIY-YIG catalytic domain-containing protein; K07461 putative endonuclease id=24658189 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
GIY-YIG catalytic domain, putative {ECO:0000313|EMBL:ABC44461.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salini
qh_3_scaffold_107_22
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24972..25301)
DNA (330bp) protein (110aa)
Glycoside hydrolase family protein n=1 Tax=Halorubrum aidingense JCM 13560 PF09_9EURY">RepID=M0PF09_9EURY
Glycoside hydrolase family protein {ECO:0000313|EMBL:EMA68626.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingens
glycoside hydrolase family protein
qh_3_scaffold_107_23
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(25537..26508)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI000376C15F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG98208.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
qh_3_scaffold_107_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26652..28187)
DNA (1536bp) protein (512aa)
hypothetical protein id=24657115 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23267.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_3_scaffold_107_25
unknown

Not on your lists

28300..28521
DNA (222bp) protein (74aa)

This feature has no annotations

qh_3_scaffold_107_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28652..29818
DNA (1167bp) protein (389aa)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:CBH23265.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBH23265.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodoth
ATP-dependent DNA helicase RecG n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5G0_SALRM
recG; ATP-dependent DNA helicase RecG
Displaying 26 items

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