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qh_3_scaffold_11

Search features with annotation key words

Displaying items 1-30 of 68 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_3_scaffold_11_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2..4201
DNA (4200bp) protein (1400aa)
Ferredoxin-dependent glutamate synthase 1 {ECO:0000313|EMBL:CBH24272.1}; EC=1.4.7.1 {ECO:0000313|EMBL:CBH24272.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedi
Ferredoxin-dependent glutamate synthase 1 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8B7_SALRM
gltB; ferredoxin-dependent glutamate synthase 1
qh_3_scaffold_11_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4153..4575
DNA (423bp) protein (141aa)
Glutamate synthase, large subunit {ECO:0000313|EMBL:ABC43994.1}; EC=1.4.1.13 {ECO:0000313|EMBL:ABC43994.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhod
gltB; glutamate synthase, large subunit; K00265 glutamate synthase (NADPH/NADH) large chain [EC:1.4.1.13 1.4.1.14] id=24659111 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
gltB; glutamate synthase, large subunit
qh_3_scaffold_11_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4721..6202
DNA (1482bp) protein (494aa)
Glutamate synthase [NADPH] small chain {ECO:0000313|EMBL:CBH24273.1}; EC=1.4.1.13 {ECO:0000313|EMBL:CBH24273.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Glutamate synthase [NADPH] small chain n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8B8_SALRM
gltD; glutamate synthase [NADPH] small chain
qh_3_scaffold_11_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6275..6724)
DNA (450bp) protein (150aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=761659 species="Bacter
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8B9_SALRM
dtd; D-tyrosyl-tRNA(Tyr) deacylase
qh_3_scaffold_11_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6886..7710
DNA (825bp) protein (275aa)
hypothetical protein
hypothetical protein id=24657887 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44795.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_3_scaffold_11_6
unknown

Not on your lists

7949..8389
DNA (441bp) protein (147aa)

This feature has no annotations

qh_3_scaffold_11_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8453..9103)
DNA (651bp) protein (217aa)
Phosphoglycerate mutase family protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S163_SALRD
phosphoglycerate mutase family protein
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:ABC45796.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
qh_3_scaffold_11_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9250..10815
DNA (1566bp) protein (522aa)
endonuclease/exonuclease/phosphatase family protein id=24657885 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
endonuclease/exonuclease/phosphatase family protein
Endonuclease/exonuclease/phosphatase family {ECO:0000313|EMBL:CBH25094.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sourc
qh_3_scaffold_11_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11387..12256
DNA (870bp) protein (290aa)
Prephenate dehydratase {ECO:0000313|EMBL:CBH25091.1}; EC=4.2.1.51 {ECO:0000313|EMBL:CBH25091.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
Prephenate dehydratase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAN6_SALRM
pheA; prephenate dehydratase
qh_3_scaffold_11_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12480..13355
DNA (876bp) protein (292aa)
Cell division protein FtsX n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAN5_SALRM
ftsX; cell division protein
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qh_3_scaffold_11_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13405..14409
DNA (1005bp) protein (335aa)
hypothetical protein
hypothetical protein id=24657881 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44522.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_3_scaffold_11_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14438..15751)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAN3_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25088.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_3_scaffold_11_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15758..17263)
DNA (1506bp) protein (502aa)
Long-chain fatty acid transport protein [Precursor] n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAN2_SALRM
fadL; Long-chain fatty acid transport protein
Long-chain fatty acid transport protein [Precursor] {ECO:0000313|EMBL:CBH25087.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.
qh_3_scaffold_11_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17515..18330)
DNA (816bp) protein (272aa)
rpoD; RNA polymerase sigma-70 factor
rpoD; RNA polymerase sigma-70 factor; K03086 RNA polymerase primary sigma factor id=24657877 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CBH25085.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
qh_3_scaffold_11_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18590..19156)
DNA (567bp) protein (189aa)
GH3 auxin-responsive promoter superfamily {ECO:0000313|EMBL:CBH25084.1}; EC=6.3.2.- {ECO:0000313|EMBL:CBH25084.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedi
GH3 auxin-responsive promoter superfamily n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAM9_SALRM
GH3; GH3 auxin-responsive promoter superfamily
qh_3_scaffold_11_16
unknown

Not on your lists

19276..20226
DNA (951bp) protein (317aa)

This feature has no annotations

qh_3_scaffold_11_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20245..21171
DNA (927bp) protein (309aa)
folP; dihydropteroate synthase; K00796 dihydropteroate synthase [EC:2.5.1.15] id=24657875 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205, ECO:0000313|EMBL:CBH25083.1}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205, ECO:0000313|EMBL:CBH2508
folP; dihydropteroate synthase
qh_3_scaffold_11_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21439..22239
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAM7_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25082.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_3_scaffold_11_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22263..22964
DNA (702bp) protein (234aa)
pcm; protein-L-isoaspartate (D-aspartate) O-methyltransferase; K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] id=24657873 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Protein-L-isoaspartate O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000256|HAMAP-Rule:MF_00090, ECO:0000313|EMBL:CBH25081.1};; L-isoaspartyl protein carboxyl methyltransfer
pcm; protein-L-isoaspartate (D-aspartate) O-methyltransferase
qh_3_scaffold_11_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23240..24943
DNA (1704bp) protein (568aa)
ctpA; carboxyl-terminal protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] id=24657871 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Carboxyl-terminal protease {ECO:0000313|EMBL:CBH25079.1}; EC=3.4.21.102 {ECO:0000313|EMBL:CBH25079.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
ctpA; carboxyl-terminal protease
qh_3_scaffold_11_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25223..26596)
DNA (1374bp) protein (458aa)
Glycolate oxidase subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAM3_SALRM
glcD; glycolate oxidase subunit
Glycolate oxidase subunit {ECO:0000313|EMBL:CBH25078.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
qh_3_scaffold_11_22
unknown

Not on your lists

26694..27371
DNA (678bp) protein (226aa)

This feature has no annotations

qh_3_scaffold_11_23
GWC2_Methylomirabilis_70_16, GWC2_Methylomirabilis_70_16, GWC2_Methylomirabilis_70_16, GWC2_Methylomirabilis_70_16, Methylomirabilis, Bacteria

Not on your lists

comp(27556..28200)
DNA (645bp) protein (215aa)
id=3824682 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=3824682 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
qh_3_scaffold_11_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28262..29656)
DNA (1395bp) protein (465aa)
Ysh1p: subunit of polyadenylation factor I
Ysh1p: subunit of polyadenylation factor I id=24657869 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ysh1p: subunit of polyadenylation factor I, putative {ECO:0000313|EMBL:ABC46323.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter
qh_3_scaffold_11_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(30001..30732)
DNA (732bp) protein (244aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494, ECO:0000313|EMBL:CBH25076.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order
Probable transaldolase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAM1_SALRM
tal; transaldolase
qh_3_scaffold_11_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

30855..32144
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAM0_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25075.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_3_scaffold_11_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(32474..33112)
DNA (639bp) protein (213aa)
hypothetical protein id=24657866 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25074.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_3_scaffold_11_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(33109..33639)
DNA (531bp) protein (177aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sa
Putative phosphoesterase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAL8_SALRM
phosphoesterase
qh_3_scaffold_11_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(33790..34470)
DNA (681bp) protein (227aa)
UPF0173 metal-dependent hydrolase SRM_02151 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAL7_SALRM
metal-dependent hydrolase
UPF0173 metal-dependent hydrolase SRM_02151 {ECO:0000256|HAMAP-Rule:MF_00457}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" s
qh_3_scaffold_11_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(34601..36316)
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAL6_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25071.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
Displaying items 1-30 of 68 in total

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