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qh_3_scaffold_156

Search features with annotation key words

Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_3_scaffold_156_1
Chondrus crispus, Chondrus, Gigartinales, Florideophyceae, Eukaryota

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1..636
DNA (636bp) protein (212aa)
Stackhouse genomic scaffold, scaffold_80 n=1 Tax=Chondrus crispus RepID=R7QRC3_CHOCR
Stackhouse genomic scaffold, scaffold_80 {ECO:0000313|EMBL:CDF41027.1}; TaxID=2769 species="Eukaryota; Rhodophyta; Florideophyceae; Gigartinales; Gigartinaceae; Chondrus.;" source="Chondrus crispus (C
hypothetical protein
qh_3_scaffold_156_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

674..1402
DNA (729bp) protein (243aa)
Deoxynucleoside kinase {ECO:0000313|EMBL:CBH24375.1}; EC=2.7.1.76 {ECO:0000313|EMBL:CBH24375.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
Deoxynucleoside kinase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8M0_SALRM
deoxynucleoside kinase
qh_3_scaffold_156_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1446..3563
DNA (2118bp) protein (706aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8L9_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24374.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_3_scaffold_156_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3673..4758
DNA (1086bp) protein (362aa)
YihY family protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S344_SALRD
yihY; YihY family protein
YihY family protein {ECO:0000313|EMBL:ABC44576.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
qh_3_scaffold_156_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4938..7124
DNA (2187bp) protein (729aa)
yaeT; outer membrane protein assembly factor yaeT id=24659207 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
yaeT; outer membrane protein assembly factor yaeT
Outer membrane protein assembly factor yaeT [Precursor] {ECO:0000313|EMBL:CBH24372.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibac
qh_3_scaffold_156_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7168..12345
DNA (5178bp) protein (1726aa)
hypothetical protein; K09800 hypothetical protein id=24659206 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24371.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
hypothetical protein
qh_3_scaffold_156_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12339..13037)
DNA (699bp) protein (233aa)
Haloacid dehalogenase, type II {ECO:0000313|EMBL:ABC45734.1}; EC=3.8.1.2 {ECO:0000313|EMBL:ABC45734.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
Haloacid dehalogenase, type II n=2 Tax=Salinibacter ruber RepID=D5H8L5_SALRM
dehII; Haloacid dehalogenase, type II
qh_3_scaffold_156_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13240..14382)
DNA (1143bp) protein (381aa)
D-lactate dehydrogenase id=24659204 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
D-lactate dehydrogenase
D-lactate dehydrogenase, putative {ECO:0000313|EMBL:CBH24369.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinib
qh_3_scaffold_156_9
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(14620..15306)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-604-O16 RepID=UPI00037D870E
ERCC4 domain-containing protein Tax=CG_Delta_01
ERCC4 domain-containing protein
qh_3_scaffold_156_10
uncultured gamma proteobacterium, Gammaproteobacteria, Proteobacteria, Bacteria

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15551..16045
DNA (495bp) protein (165aa)
Hypothetical conserved protein n=1 Tax=uncultured gamma proteobacterium RepID=H5SHX5_9GAMM
Hypothetical conserved protein {ECO:0000313|EMBL:BAL55761.1}; TaxID=86473 species="Bacteria; Proteobacteria; Gammaproteobacteria; environmental samples.;" source="uncultured gamma proteobacterium.;"
hypothetical protein
qh_3_scaffold_156_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16393..17376)
DNA (984bp) protein (328aa)
UDP-glucuronate 5'-epimerase {ECO:0000313|EMBL:ABC45872.1}; EC=5.1.3.12 {ECO:0000313|EMBL:ABC45872.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
UDP-glucuronate 5'-epimerase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4X1_SALRD
UDP-glucuronate 5'-epimerase
qh_3_scaffold_156_12
Coraliomargarita akajimensis, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(18480..19628)
DNA (1149bp) protein (383aa)
Galactokinase n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5EPI8_CORAD
galactokinase
Galactokinase {ECO:0000256|SAAS:SAAS00025843}; TaxID=583355 species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita.;" source="Coraliomargarita akajimensis (s
qh_3_scaffold_156_13
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19753..20817)
DNA (1065bp) protein (355aa)
Sorbitol dehydrogenase GutB {ECO:0000313|EMBL:KDM66975.1}; EC=1.1.1.14 {ECO:0000313|EMBL:KDM66975.1};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobact
Alcohol dehydrogenase GroES domain protein n=2 Tax=Acidiphilium RepID=A5FZ32_ACICJ
alcohol dehydrogenase
qh_3_scaffold_156_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(20894..21595)
DNA (702bp) protein (234aa)
L-ribulose-5-phosphate 4-epimerase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SDP1_RHOMR
class II aldolase/adducin family protein
Class II aldolase/adducin family protein {ECO:0000313|EMBL:AHG92420.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
qh_3_scaffold_156_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21643..23346)
DNA (1704bp) protein (568aa)
Ribulokinase {ECO:0000256|SAAS:SAAS00183333}; EC=2.7.1.16 {ECO:0000256|SAAS:SAAS00183333};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Ribulokinase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SDP0_RHOMR
Carbohydrate kinase, FGGY
qh_3_scaffold_156_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23372..24418)
DNA (1047bp) protein (349aa)
Transcriptional regulator, LacI family n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MES9_RHOM4
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ACY47379.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rh
qh_3_scaffold_156_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24548..26563)
DNA (2016bp) protein (672aa)
Transketolase {ECO:0000313|EMBL:CBH23271.1}; EC=2.2.1.1 {ECO:0000313|EMBL:CBH23271.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Saliniba
Transketolase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5G6_SALRM
tktA; transketolase
qh_3_scaffold_156_18
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26666..27139)
DNA (474bp) protein (158aa)
L-arabinose isomerase {ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|SAAS:SAAS00008909};; TaxID=698948 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteral
L-arabinose isomerase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IFP8_THETR
L-arabinose isomerase
qh_3_scaffold_156_19
Thermoanaerobacter italicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27136..28002)
DNA (867bp) protein (289aa)
L-arabinose isomerase (EC:5.3.1.4)
L-arabinose isomerase {ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|SAAS:SAAS00008909};; TaxID=580331 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterac
L-arabinose isomerase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IFP8_THETR
qh_3_scaffold_156_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(28383..29963)
DNA (1581bp) protein (527aa)
Alpha-L-arabinofuranosidase C-terminal domain family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLB6_9BACT
alpha-L-arabinofuranosidase domain protein
Alpha-L-arabinofuranosidase domain protein {ECO:0000313|EMBL:AHG92651.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
qh_3_scaffold_156_21
unknown

Not on your lists

30503..30751
DNA (249bp) protein (83aa)

This feature has no annotations

qh_3_scaffold_156_22
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30802..32562)
DNA (1761bp) protein (587aa)
RagB/SusD family protein n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FYP8_ECHVK
Uncharacterized protein {ECO:0000313|EMBL:KJF43964.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp.
RagB/SusD family protein
qh_3_scaffold_156_23
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32665..35790)
DNA (3126bp) protein (1042aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI00035EFC6B
Uncharacterized protein {ECO:0000313|EMBL:KJF43965.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp.
SusC/RagA family TonB-linked outer membrane protein
qh_3_scaffold_156_24
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

Not on your lists

36507..38132
DNA (1626bp) protein (542aa)
Na+/glucose cotransporter n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B639F4
Na+/glucose cotransporter Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
Na+/glucose cotransporter
qh_3_scaffold_156_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(38404..38856)
DNA (453bp) protein (151aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S160_SALRD
dut; deoxyuridine 5`-triphosphate nucleotidohydrolase
qh_3_scaffold_156_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(39003..40916)
DNA (1914bp) protein (638aa)
proton/peptide symporter family protein; K03305 proton-dependent oligopeptide transporter, POT family id=24657890 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
proton/peptide symporter family protein
Proton/peptide symporter family protein {ECO:0000313|EMBL:CBH25099.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
qh_3_scaffold_156_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


41395..43194
DNA (1800bp) protein (600aa)
aspS; aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] id=24657891 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Aspartate--tRNA(Asp/Asn) ligase {ECO:0000255|HAMAP-Rule:MF_00044}; EC=6.1.1.23 {ECO:0000255|HAMAP-Rule:MF_00044};; Aspartyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00044}; Short=AspRS {ECO:0000255|
aspS; aspartyl-tRNA synthetase
Displaying 27 items

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