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qh_3_scaffold_197

Search features with annotation key words

Displaying items 1-30 of 48 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_3_scaffold_197_1
unknown

Not on your lists

3..467
DNA (465bp) protein (155aa)

This feature has no annotations

qh_3_scaffold_197_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


522..1163
DNA (642bp) protein (214aa)
50S ribosomal protein L3 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H802_SALRM
rplC; 50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salin
qh_3_scaffold_197_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


1221..1874
DNA (654bp) protein (218aa)
rplD; 50S ribosomal protein L4/L1 family protein
rplD; 50S ribosomal protein L4/L1 family protein; K02926 large subunit ribosomal protein L4 id=24658959 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L4 {ECO:0000255|HAMAP-Rule:MF_01328}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qh_3_scaffold_197_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


1931..2230
DNA (300bp) protein (100aa)
rplW; 50S ribosomal protein L23
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 id=24658960 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qh_3_scaffold_197_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


2287..3135
DNA (849bp) protein (283aa)
50S ribosomal protein L2 n=2 Tax=Salinibacter ruber RepID=RL2_SALRD
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000255|HAMAP-Rule:MF_01320}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qh_3_scaffold_197_6
unknown

Not on your lists

comp(3238..3762)
DNA (525bp) protein (175aa)

This feature has no annotations

qh_3_scaffold_197_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


3804..4517
DNA (714bp) protein (238aa)
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 id=24658964 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
rpsC; 30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309, ECO:0000313|EMBL:CBH24163.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
qh_3_scaffold_197_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


4570..5010
DNA (441bp) protein (147aa)
rplP; 50S ribosomal protein L16
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 id=24658965 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qh_3_scaffold_197_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


5060..5272
DNA (213bp) protein (71aa)
rpmC; 50S ribosomal protein L29
rpmC; 50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 id=24658966 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374, ECO:0000313|EMBL:CBH24165.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qh_3_scaffold_197_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


5330..5635
DNA (306bp) protein (102aa)
rpsQ; 30S ribosomal protein S17
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 id=24658967 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qh_3_scaffold_197_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


5762..6130
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=2 Tax=Salinibacter ruber RepID=RL14_SALRD
rplN; 50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000255|HAMAP-Rule:MF_01367}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qh_3_scaffold_197_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


6217..6582
DNA (366bp) protein (122aa)
rplX; 50S ribosomal protein L24
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 id=24658969 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326, ECO:0000313|EMBL:CBH24168.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qh_3_scaffold_197_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


6744..7319
DNA (576bp) protein (192aa)
50S ribosomal protein L5 n=2 Tax=Salinibacter ruber RepID=RL5_SALRD
rplE; 50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000255|HAMAP-Rule:MF_01333}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qh_3_scaffold_197_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


7388..7657
DNA (270bp) protein (90aa)
30S ribosomal protein S14 n=2 Tax=Salinibacter ruber RepID=RS14_SALRD
rpsN2; 30S ribosomal protein S14
30S ribosomal protein S14; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain DSM 13855 / M31).;
qh_3_scaffold_197_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


7749..8150
DNA (402bp) protein (134aa)
rpsH; 30S ribosomal protein S8
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 id=24658972 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302, ECO:0000313|EMBL:CBH24171.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
qh_3_scaffold_197_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


8217..8771
DNA (555bp) protein (185aa)
rplF; 50S ribosomal protein L6
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 id=24658973 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salin
qh_3_scaffold_197_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


8834..9193
DNA (360bp) protein (120aa)
50S ribosomal protein L18 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H818_SALRM
rplR; 50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000313|EMBL:CBH24173.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qh_3_scaffold_197_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


9259..9786
DNA (528bp) protein (176aa)
rpsE; 30S ribosomal protein S5
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 id=24658975 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salin
qh_3_scaffold_197_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


10087..10557
DNA (471bp) protein (157aa)
rplO; 50S ribosomal protein L15
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 id=24658976 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qh_3_scaffold_197_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


10616..11947
DNA (1332bp) protein (444aa)
secY; preprotein translocase subunit SecY
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=24658977 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
qh_3_scaffold_197_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11975..12844
DNA (870bp) protein (290aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974, ECO:0000313|EMBL:CBH24177.1}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {EC
Methionine aminopeptidase n=2 Tax=Salinibacter ruber RepID=D5H822_SALRM
map; methionine aminopeptidase
qh_3_scaffold_197_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12844..13065
DNA (222bp) protein (74aa)
Translation initiation factor IF-1 n=2 Tax=Salinibacter ruber RepID=IF1_SALRD
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000255|HAMAP-Rule:MF_00075}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
qh_3_scaffold_197_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


13176..13559
DNA (384bp) protein (128aa)
rpsM; 30S ribosomal protein S13
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 id=24658980 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315, ECO:0000313|EMBL:CBH24179.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qh_3_scaffold_197_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


13595..13999
DNA (405bp) protein (135aa)
30S ribosomal protein S11 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H825_SALRM
rpsK; 30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310, ECO:0000313|EMBL:CBH24180.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qh_3_scaffold_197_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


14088..14690
DNA (603bp) protein (201aa)
rpsD; 30S ribosomal protein S4
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 id=24658982 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000313|EMBL:CBH24181.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
qh_3_scaffold_197_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14811..15794
DNA (984bp) protein (328aa)
rpoA; DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] id=24658983 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
DNA-directed RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00059};; RNA polymerase
rpoA; DNA-directed RNA polymerase subunit alpha
qh_3_scaffold_197_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16576..18816
DNA (2241bp) protein (747aa)
Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase {ECO:0000313|EMBL:CBH24184.1}; EC=3.1.7.2 {ECO:0000313|EMBL:CBH24184.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II
Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H829_SALRM
spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
qh_3_scaffold_197_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18839..19273
DNA (435bp) protein (145aa)
yqgF; Holliday junction resolvase; K07447 putative holliday junction resolvase [EC:3.1.-.-] id=24658987 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=761659 specie
yqgF; Holliday junction resolvase
qh_3_scaffold_197_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19309..20349)
DNA (1041bp) protein (347aa)
Uncharacterized ACR n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H833_SALRM
hypothetical protein
Uncharacterized ACR {ECO:0000313|EMBL:CBH24188.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
qh_3_scaffold_197_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20441..20968)
DNA (528bp) protein (176aa)
HIT domain-containing protein
HIT domain-containing protein id=24658989 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
HIT domain protein {ECO:0000313|EMBL:ABC45310.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (st
Displaying items 1-30 of 48 in total

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