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qh_3_scaffold_28

Search features with annotation key words

Displaying items 1-30 of 43 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_3_scaffold_28_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1..753)
DNA (753bp) protein (251aa)
pckA; phosphoenolpyruvate carboxykinase; K01610 phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] id=24659793 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
pckA; phosphoenolpyruvate carboxykinase
Phosphoenolpyruvate carboxykinase [ATP] 1 {ECO:0000255|HAMAP-Rule:MF_00453}; Short=PCK 1 {ECO:0000255|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase 1 {ECO:0000255|HAMAP-Rule:MF_00453};; Short=PEPCK 1
qh_3_scaffold_28_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1020..1883
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1I5_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC46010.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_3_scaffold_28_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2006..3568
DNA (1563bp) protein (521aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {EC
Asparagine--tRNA ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAA8_SALRM
asnS; asparaginyl-tRNA synthetase
qh_3_scaffold_28_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3697..4446
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1I7_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45419.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_3_scaffold_28_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4427..5179)
DNA (753bp) protein (251aa)
Lysophospholipase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAA6_SALRM
lysophospholipase
Lysophospholipase {ECO:0000313|EMBL:ABC46040.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (str
qh_3_scaffold_28_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5546..5809
DNA (264bp) protein (88aa)
hypothetical protein
hypothetical protein id=24659788 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24960.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_3_scaffold_28_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5977..7938
DNA (1962bp) protein (654aa)
secD; preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD id=24659787 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
secD; protein-export membrane protein secD
qh_3_scaffold_28_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7999..8910
DNA (912bp) protein (304aa)
secF; protein-export membrane protein
secF; protein-export membrane protein; K03074 preprotein translocase subunit SecF id=24659786 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
qh_3_scaffold_28_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8973..10295
DNA (1323bp) protein (441aa)
purA; adenylosuccinate synthetase; K01939 adenylosuccinate synthase [EC:6.3.4.4] id=24659785 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Adenylosuccinate synthetase {ECO:0000255|HAMAP-Rule:MF_00011}; Short=AMPSase {ECO:0000255|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000255|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000255|HAMAP-Rule:MF_00
purA; adenylosuccinate synthetase
qh_3_scaffold_28_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10351..11838
DNA (1488bp) protein (496aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
Sensor histidine kinase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAA1_SALRM
vicK; Sensor histidine kinase
qh_3_scaffold_28_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11841..13106)
DNA (1266bp) protein (422aa)
hypothetical protein
hypothetical protein id=24659783 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44797.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_3_scaffold_28_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13149..14003)
DNA (855bp) protein (285aa)
hypothetical protein
hypothetical protein; K09134 hypothetical protein id=24659782 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24953.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_3_scaffold_28_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14515..15147
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA99_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24954.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_3_scaffold_28_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15125..15547
DNA (423bp) protein (141aa)
hypothetical protein
hypothetical protein; K07460 putative endonuclease id=24659780 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
UPF0102 protein SRU_1822 {ECO:0000255|HAMAP-Rule:MF_00048}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qh_3_scaffold_28_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15682..16800)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA96_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC43698.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_3_scaffold_28_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16915..18894)
DNA (1980bp) protein (660aa)
Acetyl-coenzyme A synthetase {ECO:0000313|EMBL:CBH24950.1}; EC=6.2.1.1 {ECO:0000313|EMBL:CBH24950.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
Acetyl-coenzyme A synthetase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA95_SALRM
acs; acetyl-coenzyme A synthetase
qh_3_scaffold_28_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19195..21231
DNA (2037bp) protein (679aa)
ftsH; cell division protein; K03798 cell division protease FtsH [EC:3.4.24.-] id=24659777 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ATP-dependent zinc metalloprotease FtsH 2 {ECO:0000255|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000255|HAMAP-Rule:MF_01458};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Ince
ftsH; cell division protein FtsH
qh_3_scaffold_28_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21418..21834
DNA (417bp) protein (139aa)
msrAB; peptide methionine sulfoxide reductase; K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] id=24659776 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400
msrB; methionine-R-sulfoxide reductase
qh_3_scaffold_28_trna_1
unknown

Not on your lists

22253..22335
DNA (83bp)
transferRNA
qh_3_scaffold_28_trna_2
unknown

Not on your lists

22423..22494
DNA (72bp)
transferRNA
qh_3_scaffold_28_trna_3
unknown

Not on your lists

22588..22659
DNA (72bp)
transferRNA
qh_3_scaffold_28_trna_4
unknown

Not on your lists

22764..22835
DNA (72bp)
transferRNA
qh_3_scaffold_28_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22977..26579)
DNA (3603bp) protein (1201aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA91_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24946.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_3_scaffold_28_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26868..27395
DNA (528bp) protein (176aa)
hypothetical protein
hypothetical protein id=24659773 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24945.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_3_scaffold_28_21
unknown

Not on your lists

27469..27984
DNA (516bp) protein (172aa)

This feature has no annotations

qh_3_scaffold_28_22
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28136..30034
DNA (1899bp) protein (633aa)
TonB-dependent receptor plug n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MKE9_RHOM4
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ACY48861.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" s
qh_3_scaffold_28_23
unknown

Not on your lists

30034..30282
DNA (249bp) protein (83aa)

This feature has no annotations

qh_3_scaffold_28_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(30305..30646)
DNA (342bp) protein (114aa)
Antibiotic biosynthesis monooxygenase domain protein n=2 Tax=Salinibacter ruber RepID=Q2S1K4_SALRD
antibiotic biosynthesis monooxygenase domain-containing protein
Antibiotic biosynthesis monooxygenase domain protein {ECO:0000313|EMBL:ABC45411.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter
qh_3_scaffold_28_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(30703..32136)
DNA (1434bp) protein (478aa)
hypothetical protein
hypothetical protein id=24659771 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24942.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_3_scaffold_28_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

32229..32531
DNA (303bp) protein (101aa)
hypothetical protein
hypothetical protein id=24659770 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24943.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
Displaying items 1-30 of 43 in total

View Taxonomy