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qh_3_scaffold_85

Search features with annotation key words

Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_3_scaffold_85_1
unknown

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3..95
DNA (93bp) protein (31aa)

This feature has no annotations

qh_3_scaffold_85_2
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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408..1376
DNA (969bp) protein (323aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Salisaeta longa RepID=UPI0003B77068
TonB-dependent receptor {ECO:0000313|EMBL:ELR68773.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
TonB-dependent receptor plug
qh_3_scaffold_85_3
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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2945..3301
DNA (357bp) protein (119aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Salisaeta longa RepID=UPI0003B77068
TonB-dependent receptor {ECO:0000313|EMBL:ELR68773.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
TonB-dependent receptor plug
qh_3_scaffold_85_4
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3358..4629
DNA (1272bp) protein (424aa)
carbohydrate-binding protein SusD n=1 Tax=Salisaeta longa RepID=UPI0003B3AD56
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ98730.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
qh_3_scaffold_85_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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4834..7560
DNA (2727bp) protein (909aa)
Prolyl oligopeptidase family protein, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZ84_SALRD
prolyl oligopeptidase family protein
Prolyl oligopeptidase family protein, putative {ECO:0000313|EMBL:ABC45643.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" so
qh_3_scaffold_85_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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7767..9173
DNA (1407bp) protein (469aa)
atoC; C4-dicarboxylate transport transcriptional regulatory protein
atoC; C4-dicarboxylate transport transcriptional regulatory protein id=24658598 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
C4-dicarboxylate transport transcriptional regulatory protein {ECO:0000313|EMBL:CBH25788.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sal
qh_3_scaffold_85_7
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

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9276..9608
DNA (333bp) protein (111aa)
S23 ribosomal protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
Putative uncharacterized protein id=3174732 bin=GWC2_Deltaproteobacteria_42_51 species=Nodularia spumigena genus=Nodularia taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
protein of unknown function TIGR02436
qh_3_scaffold_85_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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9622..10200
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCN4_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25789.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_3_scaffold_85_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(10209..11288)
DNA (1080bp) protein (360aa)
Asparaginase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCN5_SALRM
asparaginase
Asparaginase {ECO:0000313|EMBL:CBH25790.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M
qh_3_scaffold_85_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(11390..12445)
DNA (1056bp) protein (352aa)
3-beta hydroxysteroid dehydrogenase/isomerase family protein
3-beta hydroxysteroid dehydrogenase/isomerase family protein id=24658601 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
3-beta hydroxysteroid dehydrogenase/isomerase family {ECO:0000313|EMBL:ABC43729.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter
qh_3_scaffold_85_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(12554..13840)
DNA (1287bp) protein (429aa)
Nucleoside:H symporter n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFB0_RHOMR
nucleoside:H symporter
Nucleoside:H symporter {ECO:0000313|EMBL:AEN73631.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marin
qh_3_scaffold_85_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14370..16646
DNA (2277bp) protein (759aa)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420, ECO:0000
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCN9_SALRM
purL; phosphoribosylformylglycinamidine synthase
qh_3_scaffold_85_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16895..17239
DNA (345bp) protein (115aa)
Thioredoxin n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCP0_SALRM
trxA; Thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077, ECO:0000313|EMBL:CBH25795.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source
qh_3_scaffold_85_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17389..18465
DNA (1077bp) protein (359aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermace
Thioredoxin reductase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZ75_SALRD
trxB; thioredoxin-disulfide reductase
qh_3_scaffold_85_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18486..19124
DNA (639bp) protein (213aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZ74_SALRD
N-acetylmuramoyl-L-alanine amidase
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ABC44556.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salini
qh_3_scaffold_85_16
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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19281..19808
DNA (528bp) protein (176aa)
Hypothetical conserved protein n=1 Tax=uncultured gamma proteobacterium RepID=H5SHX5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KHD07755.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
hypothetical protein
qh_3_scaffold_85_17
unknown

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comp(19927..20406)
DNA (480bp) protein (160aa)

This feature has no annotations

qh_3_scaffold_85_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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20792..21568
DNA (777bp) protein (259aa)
Gamma-glutamyltranspeptidase [Precursor] {ECO:0000313|EMBL:CBH25798.1}; EC=2.3.2.2 {ECO:0000313|EMBL:CBH25798.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis
Gamma-glutamyltranspeptidase [Precursor] n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCP3_SALRM
ggt; gamma-glutamyltranspeptidase
qh_3_scaffold_85_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(21655..21867)
DNA (213bp) protein (71aa)
alpha,alpha-trehalase (EC:3.2.1.28)
Alpha,alpha-trehalase {ECO:0000313|EMBL:ACY47027.1}; EC=3.2.1.28 {ECO:0000313|EMBL:ACY47027.1};; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedi
alpha,alpha-trehalase n=1 Tax=Salisaeta longa RepID=UPI0003B3BE33
Displaying 19 items

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