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qh_3_scaffold_18227

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_3_scaffold_18227_1

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comp(2..391)
DNA (390bp) protein (130aa)
Pseudouridine synthase n=1 Tax=Clostridium sp. CAG:609 RepID=R7P7D8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KKL74365.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
pseudouridine synthase
qh_3_scaffold_18227_2
unknown

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comp(358..873)
DNA (516bp) protein (172aa)

This feature has no annotations

qh_3_scaffold_18227_3
SAR86 cluster bacterium SAR86E, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(994..1419)
DNA (426bp) protein (142aa)
50S ribosomal protein L13 n=1 Tax=Spongiibacter tropicus RepID=UPI0003B3C704
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1208365 species="Bacteria; Proteobacteria; Gammaproteobacteria; SAR86 cluster.;" source="SAR86 cluster
50S ribosomal protein L13
CP, possibly TM7? Jill Banfield (10/23/14)
qh_3_scaffold_18227_4
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(1463..1774)
DNA (312bp) protein (104aa)
50S ribosomal protein L17 n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJ08_9CHLR
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Spha
rplQ; 50S ribosomal protein L17
Possibly TM7 Jill Banfield (10/23/14)
qh_3_scaffold_18227_5
RHI_Saccharibacteria_49_19, Candidatus Saccharibacteria, Bacteria

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comp(1774..1944)
DNA (171bp) protein (57aa)
rpoA; RNA polymerase (alpha subunit) (EC:2.7.7.6) Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_49_19_curated
DNA-directed RNA polymerase subunit alpha n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PNY9_9BACT
DNA-directed RNA polymerase subunit alpha
Displaying 5 items

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