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qh_3_scaffold_204

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_3_scaffold_204_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..340)
DNA (339bp) protein (113aa)
ABC-type transport system permease protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQV3_NATPD
abc23p_1; ABC-type transport system permease protein 1
ABC-type transport system permease protein {ECO:0000313|EMBL:CAI49491.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natrono
qh_3_scaffold_204_2
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(400..741)
DNA (342bp) protein (114aa)
oxidoreductase domain-containing protein Tax=RBG_16_Spirochaete_67_19_curated
oxidoreductase domain-containing protein
Oxidoreductase domain protein id=4213544 bin=GWF2_Bacteroidetes_42_66 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
qh_3_scaffold_204_3
Arthrobacter aurescens, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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902..1156
DNA (255bp) protein (85aa)
Putative transcriptional regulator, lacI family domain protein {ECO:0000313|EMBL:ABM09790.1}; TaxID=290340 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Art
qh_3_scaffold_204_4
unknown

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1181..1591
DNA (411bp) protein (137aa)

This feature has no annotations

qh_3_scaffold_204_5
bacterium UASB270, Bacteria

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comp(1629..2087)
DNA (459bp) protein (153aa)
cupin n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036978DA
Cupin 2, conserved barrel domain protein {ECO:0000313|EMBL:GAK57533.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
cupin
qh_3_scaffold_204_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(2084..3481)
DNA (1398bp) protein (466aa)
Glycosyl hydrolase, family 88 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029Z8_SOLUE
glycosyl hydrolase family protein
Glycosyl hydrolase, family 88 {ECO:0000313|EMBL:ABJ82128.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter u
qh_3_scaffold_204_7
Paenibacillus sp. JDR-2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3538..4353)
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B59422
phytanoyl-CoA dioxygenase
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:ACT02208.1}; TaxID=324057 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. (strain JDR-2).;"
qh_3_scaffold_204_8
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(4380..6218)
DNA (1839bp) protein (613aa)
Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JCP8_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:EDY83106.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
hypothetical protein
qh_3_scaffold_204_9
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(6205..7233)
DNA (1029bp) protein (343aa)
BNR/Asp-box repeat domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JCP7_9BACT
BNR/Asp-box repeat domain protein {ECO:0000313|EMBL:EDY83628.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
glycosyl hydrolase BNR repeat-containing glycosyl hydrolase
qh_3_scaffold_204_10
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(7235..9049)
DNA (1815bp) protein (605aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZY38_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB76187.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strai
qh_3_scaffold_204_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9069..10115)
DNA (1047bp) protein (349aa)
oxidoreductase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Oxidoreductase, NAD-binding domain protein id=4814656 bin=GWC2_Syntrophus__56_31 species=Desulfitobacterium hafniense genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein containing oxidoreductase-domain
qh_3_scaffold_204_12
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(10112..10963)
DNA (852bp) protein (284aa)
AP endonuclease, family 2 n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JCR4_9BACT
AP endonuclease, family 2 {ECO:0000313|EMBL:EDY84771.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
xylose isomerase domain-containing protein
qh_3_scaffold_204_13
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(10973..12298)
DNA (1326bp) protein (442aa)
sugar ABC transporter periplasmic protein; K02027 multiple sugar transport system substrate-binding protein Tax=RBG_16_Ignavibacteria_34_14_curated
sugar ABC transporter periplasmic protein
sugar binding protein id=4827572 bin=GWA2_Ignavibacteriae_55_25 species=Thermococcus zilligii genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWA2_Ignavibacteriae_55_25 organism_group=Ignavibacteria
qh_3_scaffold_204_14
Defluviitoga tunisiensis, Defluviitoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

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comp(12359..13468)
DNA (1110bp) protein (370aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BAU3_MEISD
Sugar ABC transporter, permease protein {ECO:0000313|EMBL:CEP77889.1}; TaxID=1006576 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Defluviitoga.;" source="Defluviitoga tunisiensis.;"
binding-protein-dependent transport system inner membrane protein
Displaying 14 items

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