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qh_3_scaffold_316

Search features with annotation key words

Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_3_scaffold_316_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1..966)
DNA (966bp) protein (322aa)
Glutamate synthase [NADPH] small chain {ECO:0000313|EMBL:CBH24273.1}; EC=1.4.1.13 {ECO:0000313|EMBL:CBH24273.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Glutamate synthase [NADPH] small chain n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8B8_SALRM
gltD; glutamate synthase [NADPH] small chain
qh_3_scaffold_316_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1242..5468)
DNA (4227bp) protein (1409aa)
Glutamate synthase, large subunit {ECO:0000313|EMBL:ABC43994.1}; EC=1.4.1.13 {ECO:0000313|EMBL:ABC43994.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhod
gltB; glutamate synthase, large subunit; K00265 glutamate synthase (NADPH/NADH) large chain [EC:1.4.1.13 1.4.1.14] id=24659111 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
gltB; glutamate synthase, large subunit
qh_3_scaffold_316_3
unknown

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5479..5634
DNA (156bp) protein (52aa)

This feature has no annotations

qh_3_scaffold_316_4
unknown

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comp(5941..6294)
DNA (354bp) protein (118aa)

This feature has no annotations

qh_3_scaffold_316_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6680..7249
DNA (570bp) protein (190aa)
Amidohydrolase family n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3D7_SALRD
amidohydrolase
Amidohydrolase family {ECO:0000313|EMBL:ABC45682.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
qh_3_scaffold_316_6
Pseudoalteromonas sp. ND6B, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7429..7962)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQ56_NEPCE
Beta-Ig-H3/fasciclin {ECO:0000313|EMBL:KGK01302.1}; Flags: Precursor;; TaxID=1535421 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.
hypothetical protein
qh_3_scaffold_316_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8391..8891
DNA (501bp) protein (167aa)
moaC; Molybdenum cofactor biosynthesis protein C
moaC; molybdenum cofactor biosynthesis protein C; K03637 molybdenum cofactor biosynthesis protein C id=24659109 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=761659 species="Bact
qh_3_scaffold_316_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8942..9556
DNA (615bp) protein (205aa)
hypothetical protein
hypothetical protein id=24659108 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24269.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_3_scaffold_316_9
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

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comp(9757..10164)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B74479
putative nucleic acid-binding protein, contains PIN domain
Putative nucleic acid-binding protein, contains PIN domain {ECO:0000313|EMBL:AFY47527.1}; TaxID=28072 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain AT
qh_3_scaffold_316_10
unknown

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comp(10161..10841)
DNA (681bp) protein (227aa)

This feature has no annotations

qh_3_scaffold_316_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10844..11791)
DNA (948bp) protein (316aa)
hypothetical protein
hypothetical protein id=24659107 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24268.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_3_scaffold_316_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11846..12310)
DNA (465bp) protein (155aa)
hypothetical protein id=24659106 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24267.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_3_scaffold_316_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12419..13204)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8B1_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24266.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_3_scaffold_316_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13297..14634)
DNA (1338bp) protein (446aa)
pyn; pyrimidine-nucleoside phosphorylase; K00756 pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] id=24659104 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:ABC44077.1}; EC=2.4.2.2 {ECO:0000313|EMBL:ABC44077.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rho
pyn; pyrimidine-nucleoside phosphorylase
qh_3_scaffold_316_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(14972..15214)
DNA (243bp) protein (81aa)
rpmE; 50S ribosomal protein L31
rpmE; 50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 id=24659103 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qh_3_scaffold_316_16
unknown

Not on your lists

comp(15908..16162)
DNA (255bp) protein (85aa)

This feature has no annotations

qh_3_scaffold_316_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16218..16802
DNA (585bp) protein (195aa)
Putative cystathionine gamma-lyase {ECO:0000313|EMBL:CBH24263.1}; EC=4.4.1.1 {ECO:0000313|EMBL:CBH24263.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhod
Putative cystathionine gamma-lyase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8A8_SALRM
cysA; cystathionine gamma-lyase
qh_3_scaffold_316_18
Geobacillus sp. MAS1, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16807..17235)
DNA (429bp) protein (143aa)
Uncharacterized protein n=3 Tax=Geobacillus RepID=V6VBN2_9BACI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESU71461.1}; TaxID=1408282 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. MAS1.;"
qh_3_scaffold_316_19
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(17225..17641)
DNA (417bp) protein (139aa)
Putative Nucleotidyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9A7_9BACT
putative nucleotidyltransferase
Putative Nucleotidyltransferase {ECO:0000313|EMBL:CBK39816.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
qh_3_scaffold_316_20
unknown

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17716..17934
DNA (219bp) protein (73aa)

This feature has no annotations

qh_3_scaffold_316_21

Not on your lists

comp(18072..18398)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036E3335
Uncharacterized protein {ECO:0000313|EMBL:KKN62903.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DNA polymerase beta domain-containing protein
qh_3_scaffold_316_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18532..20202)
DNA (1671bp) protein (557aa)
UvrABC system protein B n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8A7_SALRM
uvrB; UvrABC system protein B
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
Displaying 22 items

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