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qh_3_scaffold_616

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_3_scaffold_616_trna_1
unknown

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11..83
DNA (73bp)
transferRNA
qh_3_scaffold_616_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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203..388
DNA (186bp) protein (62aa)
Preprotein translocase subunit SecE
Preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE id=24659726 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
qh_3_scaffold_616_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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452..1009
DNA (558bp) protein (186aa)
nusG; transcription antitermination protein NusG
nusG; transcription termination/antitermination factor NusG; K02601 transcriptional antiterminator NusG id=24659725 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae
qh_3_scaffold_616_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1127..1570
DNA (444bp) protein (148aa)
50S ribosomal protein L11 n=3 Tax=Salinibacter ruber RepID=RL11_SALRD
rplK; 50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000313|EMBL:CBH24896.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qh_3_scaffold_616_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1694..2407
DNA (714bp) protein (238aa)
50S ribosomal protein L1 n=2 Tax=Salinibacter ruber RepID=RL1_SALRD
rplA; 50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000255|HAMAP-Rule:MF_01318}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qh_3_scaffold_616_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2457..2993
DNA (537bp) protein (179aa)
rplJ; 50S ribosomal protein L10
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 id=24659722 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qh_3_scaffold_616_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3136..3519
DNA (384bp) protein (128aa)
rplL; 50S ribosomal protein L7/L12
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 id=24659721 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L7/L12 {ECO:0000255|HAMAP-Rule:MF_00368}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
qh_3_scaffold_616_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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4160..7915
DNA (3756bp) protein (1252aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:CB
rpoB; DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] id=24659720 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
rpoB; DNA-directed RNA polymerase subunit beta
qh_3_scaffold_616_8
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8117..9163)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UY44_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEG07608.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
qh_3_scaffold_616_9

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comp(9305..10831)
DNA (1527bp) protein (509aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TKU1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHE14899.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
qh_3_scaffold_616_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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11194..12036
DNA (843bp) protein (281aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL:
rpoC; DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=24659719 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
rpoC; DNA-directed RNA polymerase subunit beta'
Displaying 11 items

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