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qh_3_scaffold_48

Search features with annotation key words

Displaying items 1-30 of 91 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_3_scaffold_48_1
Oocystis solitaria, Oocystis, Chlorellales, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

1..1032
DNA (1032bp) protein (344aa)
Photosystem II protein D1 {ECO:0000256|HAMAP-Rule:MF_01379, ECO:0000256|RuleBase:RU004332}; Short=PSII D1 protein {ECO:0000256|HAMAP-Rule:MF_01379};; EC=1.10.3.9 {ECO:0000256|HAMAP-Rule:MF_01379};; Ph
Photosystem Q(B) protein n=3 Tax=Eukaryota RepID=C7BEI6_OOCSO
photosystem q(b) protein
qh_3_scaffold_48_2
Gloeotilopsis sterilis, Gloeotilopsis, Ulotrichales, Ulvophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(1159..1953)
DNA (795bp) protein (265aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=PEP {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; Plastid-encoded RNA polymerase
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Leptolyngbya boryana RepID=UPI0003687B34
qh_3_scaffold_48_3
Pyramimonas parkeae, Pyramimonas, Pyramimonadales, Chlorophyta, Viridiplantae

Not on your lists

comp(2008..3141)
DNA (1134bp) protein (378aa)
Hypothetical chloroplast RF1 n=1 Tax=Pyramimonas parkeae RepID=C0JX63_9CHLO
Hypothetical chloroplast RF1 {ECO:0000313|EMBL:ACJ71141.1}; TaxID=36894 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Pyramimonadales; Pyramimonas.;" source="Pyramimonas parkeae.;"
qh_3_scaffold_48_4
Nephroselmis astigmatica, Nephroselmis, Nephroselmidophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(3171..5528)
DNA (2358bp) protein (786aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=259378 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Nephroselmidophyce
rpoBC; DNA-directed RNA polymerase, beta and beta' subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=2 Tax=Ostreococcus tauri RepID=RPOC1_OSTTA
qh_3_scaffold_48_5
unknown

Not on your lists

comp(5792..5974)
DNA (183bp) protein (61aa)

This feature has no annotations

qh_3_scaffold_48_6
Gloeotilopsis sterilis, Gloeotilopsis, Ulotrichales, Ulvophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(6777..8069)
DNA (1293bp) protein (431aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; PEP {ECO:0000256|HAMAP-Rule:MF_01321}; Plastid-encoded RNA polymerase subunit
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Pedinomonas minor RepID=C7BEK8_PEDMN
qh_3_scaffold_48_7
Synechococcus sp. PCC 7502, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8187..11474)
DNA (3288bp) protein (1096aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI000345E02E
DNA-directed RNA polymerase subunit beta
qh_3_scaffold_48_trna_1
unknown

Not on your lists

11803..11873
DNA (71bp)
transferRNA
qh_3_scaffold_48_8
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


comp(11965..12333)
DNA (369bp) protein (123aa)
30S ribosomal protein S14 n=13 Tax=Microcystis RepID=A8YGG9_MICAE
rpsN; 30S ribosomal protein S14
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=721123 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 9701
qh_3_scaffold_48_9
Ostreococcus tauri, Ostreococcus, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists


comp(12422..12676)
DNA (255bp) protein (85aa)
50S ribosomal protein L20, chloroplastic n=2 Tax=Ostreococcus tauri RepID=RK20_OSTTA
50S ribosomal protein L20, chloroplastic {ECO:0000255|HAMAP-Rule:MF_00382}; TaxID=70448 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ost
rplT; 50S ribosomal protein L20
qh_3_scaffold_48_trna_26
unknown

Not on your lists

comp(13017..13090)
DNA (74bp)
transferRNA
qh_3_scaffold_48_10
unknown

Not on your lists

13138..13545
DNA (408bp) protein (136aa)

This feature has no annotations

qh_3_scaffold_48_11
Trebouxiophyceae sp. MX-AZ01, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

13684..15936
DNA (2253bp) protein (751aa)
Photosystem I P700 chlorophyll a apoprotein A1 {ECO:0000256|HAMAP-Rule:MF_00458}; EC=1.97.1.12 {ECO:0000256|HAMAP-Rule:MF_00458};; PSI-A {ECO:0000256|HAMAP-Rule:MF_00458}; PsaA {ECO:0000256|HAMAP-Rule
Photosystem I P700 chlorophyll a apoprotein A1 n=1 Tax=Trebouxiophyceae sp. MX-AZ01 RepID=J7K6S9_9CHLO
photosystem I core protein PsaA
qh_3_scaffold_48_12
Chlorokybus atmophyticus, Chlorokybus, Chlorokybales, Chlorokybophyceae, Streptophyta, Viridiplantae

Not on your lists

15968..18211
DNA (2244bp) protein (748aa)
Photosystem I P700 chlorophyll a apoprotein A2 {ECO:0000255|HAMAP-Rule:MF_00482}; EC=1.97.1.12 {ECO:0000255|HAMAP-Rule:MF_00482};; PSI-B {ECO:0000255|HAMAP-Rule:MF_00482}; PsaB {ECO:0000255|HAMAP-Rule
Photosystem I P700 chlorophyll a apoprotein A2 n=1 Tax=Chlorokybus atmophyticus RepID=PSAB_CHLAT
photosystem I core protein PsaB
qh_3_scaffold_48_13
Micromonas sp. RCC299, Micromonas, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

18752..19810
DNA (1059bp) protein (353aa)
Photosystem II D2 protein {ECO:0000256|HAMAP-Rule:MF_01383, ECO:0000256|RuleBase:RU004333}; Short=PSII D2 protein {ECO:0000256|HAMAP-Rule:MF_01383};; EC=1.10.3.9 {ECO:0000256|HAMAP-Rule:MF_01383};; Ph
Photosystem II D2 protein n=1 Tax=Micromonas sp. (strain RCC299 / NOUM17) RepID=C1KR26_MICSR
Photosystem II DII subunit, Q(A) protein
qh_3_scaffold_48_14
Bathycoccus prasinos, Bathycoccus, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

19794..21179
DNA (1386bp) protein (462aa)
Photosystem II CP43 protein n=1 Tax=Bathycoccus prasinos RepID=K8FE46_9CHLO
Photosystem II CP43 reaction center protein {ECO:0000256|HAMAP-Rule:MF_01496, ECO:0000256|RuleBase:RU004533}; PSII 43 kDa protein {ECO:0000256|HAMAP-Rule:MF_01496}; Protein CP-43 {ECO:0000256|HAMAP-Ru
photosystem II 44 kDa subunit reaction center protein
qh_3_scaffold_48_trna_2
unknown

Not on your lists

21253..21333
DNA (81bp)
transferRNA
qh_3_scaffold_48_trna_3
unknown

Not on your lists

21381..21467
DNA (87bp)
transferRNA
qh_3_scaffold_48_15
Ostreococcus tauri, Ostreococcus, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(21516..22316)
DNA (801bp) protein (267aa)
Site-determining protein (Fragment) n=1 Tax=Ostreococcus tauri RepID=Q01DV1_OSTTA
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=70448 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus.;" sourc
septum site-determining protein MinD
qh_3_scaffold_48_16
Ostreococcus tauri, Ostreococcus, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

22590..23237
DNA (648bp) protein (216aa)
Cytochrome b6 n=2 Tax=Ostreococcus tauri RepID=CYB6_OSTTA
Cytochrome b6 {ECO:0000255|HAMAP-Rule:MF_00633}; TaxID=70448 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus.;" source="Ostreo
cytochrome b subunit of the bc complex
qh_3_scaffold_48_17
Coccomyxa subellipsoidea, Coccomyxa, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

23387..23869
DNA (483bp) protein (161aa)
Cytochrome b6-f complex subunit 4 n=1 Tax=Coccomyxa subellipsoidea C-169 RepID=E9NPX6_9CHLO
Cytochrome b6-f complex subunit 4 {ECO:0000256|HAMAP-Rule:MF_01344}; 17 kDa polypeptide {ECO:0000256|HAMAP-Rule:MF_01344}; TaxID=574566 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae
Cytochrome b6-f complex subunit 4
qh_3_scaffold_48_trna_4
unknown

Not on your lists

23974..24044
DNA (71bp)
transferRNA
qh_3_scaffold_48_18
Monomastix sp. OKE-1, Monomastix, Monomastigales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

24089..24604
DNA (516bp) protein (172aa)
Photosystem I assembly protein Ycf3 n=1 Tax=Monomastix sp. (strain OKE-1) RepID=C0JWJ5_MONSK
Photosystem I assembly protein Ycf3 {ECO:0000256|HAMAP-Rule:MF_00439}; TaxID=141716 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Monomastigales; Monomastigaceae; Mon
ycf3; photosystem I assembly protein Ycf3
qh_3_scaffold_48_19
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

24667..24912
DNA (246bp) protein (82aa)
Photosystem I iron-sulfur center {ECO:0000256|HAMAP-Rule:MF_01303}; EC=1.97.1.12 {ECO:0000256|HAMAP-Rule:MF_01303};; 9 kDa polypeptide {ECO:0000256|HAMAP-Rule:MF_01303}; PSI-C {ECO:0000256|HAMAP-Rule:
Photosystem I iron-sulfur center n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VGP1_9CYAN
Photosystem I iron-sulfur center
qh_3_scaffold_48_trna_5
unknown

Not on your lists

25060..25131
DNA (72bp)
transferRNA
qh_3_scaffold_48_trna_6
unknown

Not on your lists

25147..25220
DNA (74bp)
transferRNA
qh_3_scaffold_48_trna_7
unknown

Not on your lists

25244..25326
DNA (83bp)
transferRNA
qh_3_scaffold_48_trna_8
unknown

Not on your lists

25355..25427
DNA (73bp)
transferRNA
qh_3_scaffold_48_trna_9
unknown

Not on your lists

25440..25511
DNA (72bp)
transferRNA
qh_3_scaffold_48_20
Oocystis solitaria, Oocystis, Chlorellales, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

25589..27016
DNA (1428bp) protein (476aa)
Ribulose bisphosphate carboxylase large chain {ECO:0000256|HAMAP-Rule:MF_01338}; Short=RuBisCO large subunit {ECO:0000256|HAMAP-Rule:MF_01338};; EC=4.1.1.39 {ECO:0000256|HAMAP-Rule:MF_01338};; TaxID=1
ribulose 1,5-bisphosphate carboxylase large subunit (EC:4.1.1.39)
Ribulose bisphosphate carboxylase large chain n=2 Tax=Oocystis RepID=C7BEH6_OOCSO
Displaying items 1-30 of 91 in total

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