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qh_6_scaffold_230

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_230_1

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116..1039
DNA (924bp) protein (308aa)
Transposase family protein n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8L660_9CYAN
Transposase DDE domain protein {ECO:0000313|EMBL:AIA12275.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
qh_6_scaffold_230_2
unknown

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1856..2368
DNA (513bp) protein (171aa)

This feature has no annotations

qh_6_scaffold_230_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3244..4239
DNA (996bp) protein (332aa)
Initiator Replication protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D6CW34_SALRM
repB; Initiator Replication protein
Initiator Replication protein {ECO:0000313|EMBL:CBH22863.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qh_6_scaffold_230_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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4482..5114
DNA (633bp) protein (211aa)
Plasmid partitioning protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4D8_SALRM
parA; plasmid partitioning protein
Plasmid partitioning protein {ECO:0000313|EMBL:CBH22778.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qh_6_scaffold_230_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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5124..5357
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4D9_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH22779.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_6_scaffold_230_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(5444..5554)
DNA (111bp) protein (37aa)
Uncharacterized protein {ECO:0000313|EMBL:CBH22764.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_6_scaffold_230_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(5568..5819)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4C4_SALRM
ribonuclease H
Uncharacterized protein {ECO:0000313|EMBL:CBH22764.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_6_scaffold_230_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(5918..6436)
DNA (519bp) protein (173aa)
ISSru3, transposase insB n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4N0_SALRD
ISSru3, transposase insB
ISSru3, transposase insB {ECO:0000313|EMBL:ABC44376.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
qh_6_scaffold_230_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(6400..6678)
DNA (279bp) protein (93aa)
Insertion element n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6P2_SALRM
Insertion element
Insertion element {ECO:0000313|EMBL:CBH23697.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (str
qh_6_scaffold_230_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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7286..8023
DNA (738bp) protein (246aa)
CRISPR-associated protein Cse3 n=1 Tax=Salisaeta longa RepID=UPI0003B3B70B
CRISPR-associated protein, Cse3 family
CRISPR-associated protein, Cse3 family {ECO:0000313|EMBL:ACY47387.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rh
qh_6_scaffold_230_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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8237..10693
DNA (2457bp) protein (819aa)
CRISPR-associated protein Cas3 n=1 Tax=Salisaeta longa RepID=UPI0003B42EAF
CRISPR-associated helicase Cas3
CRISPR-associated helicase Cas3 {ECO:0000313|EMBL:ACY47382.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodother
qh_6_scaffold_230_12
unknown

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10668..12107
DNA (1440bp) protein (480aa)

This feature has no annotations

qh_6_scaffold_230_13
unknown

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12112..12528
DNA (417bp) protein (139aa)

This feature has no annotations

qh_6_scaffold_230_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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12525..13754
DNA (1230bp) protein (410aa)
CRISPR-associated protein Cse4 n=1 Tax=Salisaeta longa RepID=UPI0003B49568
CRISPR-associated protein, Cse4 family
CRISPR-associated protein, Cse4 family {ECO:0000313|EMBL:ACY47385.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rh
qh_6_scaffold_230_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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13751..14431
DNA (681bp) protein (227aa)
CRISPR-associated protein Cas5 family n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MET6_RHOM4
CRISPR-associated protein Cas5 family
CRISPR-associated protein Cas5 family {ECO:0000313|EMBL:ACY47386.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rho
qh_6_scaffold_230_16
Streptomyces sp. HK1, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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14528..14782
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. HK1 RepID=B0LU64_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ABY83545.1}; TaxID=405041 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HK1.;"
qh_6_scaffold_230_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(15418..15735)
DNA (318bp) protein (106aa)
hypothetical protein
hypothetical protein id=24657921 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC46213.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
Displaying 17 items

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