ggKbase home page

qh_6_scaffold_232

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_232_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19..1191)
DNA (1173bp) protein (391aa)
hypothetical protein
hypothetical protein id=24658128 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25330.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_6_scaffold_232_2
Psychroflexus torquis, Psychroflexus, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1234..4350)
DNA (3117bp) protein (1039aa)
Type I restriction-modification system, restriction subunit R HsdR n=1 Tax=Psychroflexus torquis (strain ATCC 700755 / ACAM 623) RepID=K4IDQ9_PSYTT
type I restriction-modification system, restriction subunit R HsdR
Type I restriction-modification system, restriction subunit R HsdR {ECO:0000313|EMBL:AFU67261.1}; TaxID=313595 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Ps
qh_6_scaffold_232_3
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(4354..5013)
DNA (660bp) protein (220aa)
type I restriction-modification system, M subunit n=1 Tax=Lentibacillus jeotgali RepID=UPI0002628011
type I restriction enzyme specificity chain-like protein
Type I restriction enzyme specificity chain-like protein {ECO:0000313|EMBL:AIE86040.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimon
qh_6_scaffold_232_4
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5366..5671)
DNA (306bp) protein (102aa)
Type I restriction-modification system, S subunit, EcoA family protein n=1 Tax=Pseudomonas stutzeri ATCC 14405 = CCUG 16156 RepID=H7EZJ9_PSEST
Type I restriction-modification system, S subunit, EcoA family protein {ECO:0000313|EMBL:EHY79173.1}; TaxID=32042 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadac
type I restriction-modification system, S subunit, EcoA family
qh_6_scaffold_232_5
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5728..6894)
DNA (1167bp) protein (389aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LJY8_SYNFM
filamentation induced by cAMP protein fic
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:ABK17740.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter
qh_6_scaffold_232_6

Not on your lists

comp(7042..8583)
DNA (1542bp) protein (514aa)
Type I restriction-modification system, M subunit id=4276600 bin=GWC2_Ignavibacteria_38_9 species=Leptospira santarosai genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
Uncharacterized protein {ECO:0000313|EMBL:EKE02602.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
type I restriction-modification system, DNA-methyltransferase subunit M HsdM
qh_6_scaffold_232_7

Not on your lists

comp(8587..9147)
DNA (561bp) protein (187aa)
hypothetical protein id=17885 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
Uncharacterized protein {ECO:0000313|EMBL:EKE02601.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
qh_6_scaffold_232_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9217..11364)
DNA (2148bp) protein (716aa)
mcrA; helicase
mcrA; helicase id=24658233 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative helicase {ECO:0000313|EMBL:CBH25436.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (str
qh_6_scaffold_232_9
unknown

Not on your lists

11469..11570
DNA (102bp) protein (34aa)

This feature has no annotations

qh_6_scaffold_232_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11910..12536
DNA (627bp) protein (209aa)
Phage integrase family n=1 Tax=Salinibacter ruber (strain M8) RepID=D6CVZ9_SALRM
xerC; Phage integrase family
Phage integrase family {ECO:0000313|EMBL:CBH22828.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
qh_6_scaffold_232_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12736..13740
DNA (1005bp) protein (335aa)
IS110 family transposase
IS110 family transposase id=24657011 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
IS110 family transposase {ECO:0000313|EMBL:ABC43961.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
qh_6_scaffold_232_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13781..14545)
DNA (765bp) protein (255aa)
IS5 family transposase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4E1_SALRM
IS5 family transposase
IS5 family transposase {ECO:0000313|EMBL:CBH22781.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
qh_6_scaffold_232_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14945..15139)
DNA (195bp) protein (65aa)
aminopeptidase; K01269 aminopeptidase [EC:3.4.11.-] id=24656859 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Aminopeptidase {ECO:0000313|EMBL:CBH22970.1}; EC=3.4.11.- {ECO:0000313|EMBL:CBH22970.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
pepB; aminopeptidase
Displaying 13 items

View Taxonomy