ggKbase home page

qh_6_scaffold_59

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_59_1
unknown

Not on your lists

237..521
DNA (285bp) protein (95aa)

This feature has no annotations

qh_6_scaffold_59_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

518..2317
DNA (1800bp) protein (600aa)
ABC transporter, transmembrane region n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6F9_SALRM
ABC transporter
ABC transporter, transmembrane region {ECO:0000313|EMBL:CBH23614.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sal
qh_6_scaffold_59_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2488..4005
DNA (1518bp) protein (506aa)
NDP-sugar dehydrogenase id=24657452 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
NDP-sugar dehydrogenase
NDP-sugar dehydrogenase, putative {ECO:0000313|EMBL:ABC45357.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinib
qh_6_scaffold_59_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4002..4994
DNA (993bp) protein (331aa)
nucleoside-diphosphate-sugar epimerase
nucleoside-diphosphate-sugar epimerase id=24657453 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:ABC45959.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
qh_6_scaffold_59_5
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5058..6182
DNA (1125bp) protein (375aa)
Putative DegT/DnrJ/EryC1/StrS aminotransferase family O-antigen related protein id=3330051 bin=GWF2_Bacteroidetes_35_48 species=Bacteroides fragilis genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
DegT/DnrJ/EryC1/StrS aminotransferase family O-antigen-like protein Tax=GWF2_Bacteroidetes_35_48_curated
putative DegT/DnrJ/EryC1/StrS aminotransferase family O-antigen related protein
qh_6_scaffold_59_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6231..6824
DNA (594bp) protein (198aa)
Putative capsular polysaccharide related hexapeptide transferase family protein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LHA3_BACFN
putative capsular polysaccharide related hexapeptide transferase family protein
Putative capsular polysaccharide related hexapeptide transferase family protein {ECO:0000313|EMBL:CAH06481.1}; TaxID=272559 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae
qh_6_scaffold_59_7
RIFOXYD12_FULL_Rhodospirillales_60_8_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6843..7859
DNA (1017bp) protein (339aa)
Tax=RIFOXYD12_FULL_Rhodospirillales_60_8_curated
qh_6_scaffold_59_8
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7922..8608
DNA (687bp) protein (229aa)
Predicted polysaccharide biosynthesis protein with acetyltransferase domain n=1 Tax=Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC) RepID=D8GN08_CLOLD
acylneuraminate cytidylyltransferase
Acylneuraminate cytidylyltransferase {ECO:0000313|EMBL:AGY76839.1}; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoethan
qh_6_scaffold_59_9
Bacillus pumilus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8625..9707
DNA (1083bp) protein (361aa)
Spore coat polysaccharide biosynthesis protein SpsE n=1 Tax=Bacillus pumilus (strain SAFR-032) RepID=A8FIL6_BACP2
spsE; spore coat polysaccharide biosynthesis protein SpsE
Spore coat polysaccharide biosynthesis protein SpsE {ECO:0000313|EMBL:ABV64083.1}; TaxID=315750 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus pumilus (s
qh_6_scaffold_59_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9762..10817
DNA (1056bp) protein (352aa)
Putative mannose-1-phosphate guanyltransferase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4Y1_SALRD
mannose-1-phosphate guanyltransferase
Putative mannose-1-phosphate guanyltransferase {ECO:0000313|EMBL:ABC45760.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" so
qh_6_scaffold_59_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10814..11506
DNA (693bp) protein (231aa)
CMP-N-acetlyneuraminic acid synthetase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4Y0_SALRD
CMP-N-acetlyneuraminic acid synthetase
CMP-N-acetlyneuraminic acid synthetase {ECO:0000313|EMBL:ABC43898.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
qh_6_scaffold_59_12
Neosynechococcus sphagnicola, Neosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

11565..12548
DNA (984bp) protein (328aa)
Sulfotransferase family protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T8H5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KGF72293.1}; TaxID=1497020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Neosynechococcus.;" source="Neosynechococcus sphagnicola sy
sulfotransferase
qh_6_scaffold_59_13
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12551..13828
DNA (1278bp) protein (426aa)
Protein containing aminopeptidase domain n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6ASM6_9RHOB
Aminopeptidase {ECO:0000313|EMBL:KGP01447.1}; TaxID=511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis.;"
hypothetical protein
qh_6_scaffold_59_14
unknown

Not on your lists

comp(13825..14058)
DNA (234bp) protein (78aa)

This feature has no annotations

qh_6_scaffold_59_15
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

14438..15799
DNA (1362bp) protein (454aa)
Putative uncharacterized protein id=4103809 bin=GWF2_Lentisphaerae_57_35 species=Bacteroides fluxus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein Tax=GWF2_Lentisphaerae_57_35_curated
hypothetical protein
qh_6_scaffold_59_16
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

16554..16970
DNA (417bp) protein (139aa)
Glycosyltransferase n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TFT1_9CYAN
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AFY81400.1}; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acuminata PCC 6304.;"
qh_6_scaffold_59_17
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17014..17259
DNA (246bp) protein (82aa)
colanic acid biosynthesis glycosyl transferase n=1 Tax=Methylococcus capsulatus RepID=UPI0002EDDD36
colanic acid biosynthesis glycosyl transferase
Putative colanic acid biosynthesis glycosyl transferase {ECO:0000313|EMBL:AAU91856.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloco
qh_6_scaffold_59_18
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

17274..18173
DNA (900bp) protein (300aa)
glycosyl transferase id=14425573 bin=bin1_lowGC species=Pyrococcus abyssi genus=Pyrococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=bin1_lowGC organism_group=Unknown_CP
glycosyl transferase Tax=CSP1_2_Dadabacteria
Beta-1,3-glucosyltransferase
qh_6_scaffold_59_19
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

18201..19151
DNA (951bp) protein (317aa)
Glr0465 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NNE6_GLOVI
hypothetical protein
Glr0465 protein {ECO:0000313|EMBL:BAC88406.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
qh_6_scaffold_59_20
Methylophaga thiooxydans, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19233..20225
DNA (993bp) protein (331aa)
polysaccharide deacetylase (EC:3.1.1.58)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJT RepID=UPI00036AC5C8
Uncharacterized protein {ECO:0000313|EMBL:KGM06564.1}; TaxID=392484 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga thi
qh_6_scaffold_59_21
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20222..21097
DNA (876bp) protein (292aa)
Sulfotransferase domain containing protein n=1 Tax=Beggiatoa sp. PS RepID=A7BSU0_9GAMM
conserved hypothetical protein
Sulfotransferase family protein {ECO:0000313|EMBL:AHM58415.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flam
qh_6_scaffold_59_22
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21186..22262
DNA (1077bp) protein (359aa)
Glycosyltransferase n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JS51_9EURY
Glycosyltransferase {ECO:0000313|EMBL:EMA11801.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC 3379
group 1 glycosyl transferase
qh_6_scaffold_59_23
unknown

Not on your lists

22252..23511
DNA (1260bp) protein (420aa)

This feature has no annotations

qh_6_scaffold_59_24
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23511..24416
DNA (906bp) protein (302aa)
Sulfotransferase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LGC4_SYNFM
sulfotransferase
Sulfotransferase {ECO:0000313|EMBL:ABK16476.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobact
qh_6_scaffold_59_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24421..25215
DNA (795bp) protein (265aa)
Sulfotransferase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6H8_SALRM
Sulfotransferase
Sulfotransferase {ECO:0000313|EMBL:CBH23633.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (stra
qh_6_scaffold_59_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25221..26348
DNA (1128bp) protein (376aa)
Glycosyltransferase, group 1 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6H9_SALRM
rfaG; glycosyltransferase family protein
Glycosyltransferase, group 1 {ECO:0000313|EMBL:CBH23634.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qh_6_scaffold_59_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26649..27554
DNA (906bp) protein (302aa)
UDP-glucuronate 5'-epimerase {ECO:0000313|EMBL:CBH23636.1}; EC=5.1.3.2 {ECO:0000313|EMBL:CBH23636.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
UDP-glucuronate 5'-epimerase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6I1_SALRM
lspL; UDP-glucuronate 5'-epimerase
qh_6_scaffold_59_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28578..29042
DNA (465bp) protein (155aa)
Glycosyltransferase, group 1 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6H9_SALRM
rfaG; glycosyltransferase family protein
Glycosyltransferase, group 1 {ECO:0000313|EMBL:CBH23634.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qh_6_scaffold_59_29
Mycobacterium cosmeticum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29102..30199
DNA (1098bp) protein (366aa)
Methyltransferase type 11 n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J297_FRASU
Methyltransferase domain protein {ECO:0000313|EMBL:CDO07004.1}; TaxID=258533 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium cosmeticum.;
methyltransferase type 11
qh_6_scaffold_59_30
unknown

Not on your lists

30217..30366
DNA (150bp) protein (50aa)

This feature has no annotations

Displaying items 1-30 of 35 in total

View Taxonomy