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QH_6_UNK

In projects: QH_6  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.84 Longest contig: 86.52 Kbp Bin length: 43.49 Mbp GC content: 61.40 %
Contigs count: 17572 Features count: 56719 rRNAs count: 11 tRNAs count: 537

Genome completeness

megabin RP 45 / 55 MC: 35 BSCG 42 / 51 MC: 35 ASCG 38 / 38 MC: 38
Displaying items 17001-17050 of 17572 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_6_scaffold_22320 5 1016 bp 61.61 5.61 103.35
qh_6_scaffold_9329 3 2708 bp 54.32 5.61 98.38
qh_6_scaffold_27144 2 1587 bp 49.46 5.61 40.45
qh_6_scaffold_20999
Species: Natrialba aegyptia (50%)
2 1070 bp 43.64 5.61 97.29
qh_6_scaffold_15939 2 1338 bp 43.12 5.61 100.22
qh_6_scaffold_15940 1 1338 bp 54.33 5.61 58.30
qh_6_scaffold_9921
Species: Halococcus thailandensis (50%)
2 1853 bp 49.38 5.61 100.05
qh_6_scaffold_13661
Class: Halobacteria (66.67%)
3 1497 bp 56.78 5.61 94.99
qh_6_scaffold_28551 3 1997 bp 61.39 5.61 87.13
qh_6_scaffold_14368 2 1444 bp 61.91 5.61 74.38
qh_6_scaffold_13681
Species: Galdieria sulphuraria (100%)
1 1496 bp 53.61 5.61 99.87
qh_6_scaffold_3914 3 3176 bp 53.94 5.60 98.71
qh_6_scaffold_14081
Species: Halorhabdus tiamatea (50%)
2 1465 bp 53.99 5.60 100.14
qh_6_scaffold_5082
Species: Halovirus HHTV-1 (80%)
5 5146 bp 53.32 5.60 83.42
qh_6_scaffold_18012 1 1214 bp 57.58 5.60 55.11
qh_6_scaffold_24303 3 1411 bp 53.22 5.60 64.63
qh_6_scaffold_11421 6 3662 bp 55.08 5.60 77.74
qh_6_scaffold_16494 2 1304 bp 56.83 5.60 97.78
qh_6_scaffold_7845
Order: Natrialbales (50%)
4 2989 bp 48.58 5.59 55.40
qh_6_scaffold_12767 1 1573 bp 54.42 5.59 88.49
qh_6_scaffold_17018 1 1273 bp 55.22 5.58 15.55
qh_6_scaffold_33449 3 1200 bp 50.25 5.58 58.75
qh_6_scaffold_35081
Species: Haloferax lucentense (66.67%)
3 1236 bp 53.24 5.58 77.43
qh_6_scaffold_18208 1 1991 bp 47.61 5.58 40.68
qh_6_scaffold_15267 2 1381 bp 57.49 5.58 38.67
qh_6_scaffold_9285 3 3036 bp 51.45 5.57 98.22
qh_6_scaffold_14472
Genus: Halococcus (66.67%)
3 1436 bp 52.23 5.57 70.61
qh_6_scaffold_20011 2 1114 bp 52.51 5.57 99.37
qh_6_scaffold_18929
Species: Halorubrum sp. AJ67 (50%)
2 1168 bp 53.34 5.57 92.72
qh_6_scaffold_18252 2 1202 bp 39.85 5.57 94.09
qh_6_scaffold_8856 3 2910 bp 57.42 5.57 95.88
qh_6_scaffold_15794 2 1346 bp 55.35 5.57 33.66
qh_6_scaffold_27739 5 2228 bp 53.37 5.57 65.44
qh_6_scaffold_22520
Species: Candidatus Nanosalinarum sp. J07AB56 (50%)
2 1007 bp 55.91 5.56 58.09
qh_6_scaffold_15204 2 1385 bp 52.56 5.56 91.62
qh_6_scaffold_11299
Class: Halobacteria (66.67%)
3 1710 bp 49.59 5.56 86.32
qh_6_scaffold_20765 1 1080 bp 55.37 5.56 99.72
qh_6_scaffold_26022
Species: Candidatus Methylomirabilis oxyfera (50%)
2 1673 bp 63.36 5.56 89.66
qh_6_scaffold_18526 1 1188 bp 34.68 5.56 75.00
qh_6_scaffold_24605 1 1712 bp 54.79 5.55 34.17
qh_6_scaffold_18827 3 1856 bp 54.69 5.55 97.95
qh_6_scaffold_12222
Species: Rhodothermus marinus (66.67%)
3 1622 bp 58.26 5.55 81.94
qh_6_scaffold_15452
Species: RBG_16_Ignavibacteria_34_14_curated (100%)
1 1369 bp 40.76 5.55 91.38
qh_6_scaffold_16009
Species: Candidatus Brocadia sinica (50%)
2 1334 bp 42.80 5.55 97.15
qh_6_scaffold_9732
Species: Synechococcus phage S-CBM2 (100%)
1 1877 bp 57.11 5.54 96.86
qh_6_scaffold_17764 1 1228 bp 48.29 5.54 29.32
qh_6_scaffold_17790 2 1227 bp 51.18 5.54 53.06
qh_6_scaffold_36184
Species: Salinibacter ruber (50%)
2 1353 bp 51.88 5.54 44.57
qh_6_scaffold_16268
Species: Rhodothermus marinus (50%)
2 1317 bp 61.28 5.54 96.13
qh_6_scaffold_15637
Species: Halorubrum coriense (100%)
1 1357 bp 60.21 5.53 87.99
Displaying items 17001-17050 of 17572 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.