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qh_6_scaffold_454

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_454_1
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..533)
DNA (531bp) protein (177aa)
Branched-chain alpha-keto acid dehydrogenase subunit E2 n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MRP8_HALMO
Branched-chain alpha-keto acid dehydrogenase subunit E2 {ECO:0000313|EMBL:EMA48306.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
branched-chain alpha-keto acid dehydrogenase subunit E2
qh_6_scaffold_454_2
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(533..1516)
DNA (984bp) protein (328aa)
Transketolase central region n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MRE7_HALMO
Transketolase central region {ECO:0000313|EMBL:EMA48307.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM
transketolase central subunit
qh_6_scaffold_454_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1513..2604)
DNA (1092bp) protein (364aa)
Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2T5_9EURY
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000313|EMBL:ELZ29153.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="H
pyruvate dehydrogenase E1 component subunit alpha
qh_6_scaffold_454_4
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2773..3714)
DNA (942bp) protein (314aa)
Probable lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}
Probable lipoyl synthase n=2 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTG3_HALBP
lipoate synthase
qh_6_scaffold_454_5
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3838..3975)
DNA (138bp) protein (46aa)
UPF0753 protein Hbor_38520 {ECO:0000256|HAMAP-Rule:MF_01871}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum bori
qh_6_scaffold_454_6
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4024..4227)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1NF87_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG95735.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
qh_6_scaffold_454_7
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4538..6781)
DNA (2244bp) protein (748aa)
Sec-independent periplasmic protein translocase n=3 Tax=Halococcus hamelinensis RepID=M0M4P0_9EURY
Sec-independent periplasmic protein translocase {ECO:0000313|EMBL:EMA40782.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
tatC; twin-arginine translocation protein TatC
qh_6_scaffold_454_8
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6876..8117
DNA (1242bp) protein (414aa)
Protein export n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PJ60_9EURY
tatC; twin-arginine translocation protein TatC
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" sourc
qh_6_scaffold_454_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8150..8767)
DNA (618bp) protein (206aa)
Methyltransferase type 12 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QNS0_9EURY
Methyltransferase type 12 {ECO:0000313|EMBL:EFW93573.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihaloph
type 12 methyltransferase
qh_6_scaffold_454_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8923..9321)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4W9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29224.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_6_scaffold_454_11
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9389..9829)
DNA (441bp) protein (147aa)
TATA-box-binding protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NQZ4_HALBP
tata binding protein of transcription factor tfiid
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rul
qh_6_scaffold_454_12
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9922..10914
DNA (993bp) protein (331aa)
RNA methylase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J610_HALJB
hypothetical protein
RNA methylase {ECO:0000313|EMBL:ELY34138.1}; Uncharacterized protein {ECO:0000313|EMBL:ADJ13816.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halal
qh_6_scaffold_454_13
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10981..11736
DNA (756bp) protein (252aa)
rlmE; 23S rRNA (uridine-2'-O-) methyltransferase (EC:2.1.1.166)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547};
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTZ7_NATM8
qh_6_scaffold_454_14
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11809..11985
DNA (177bp) protein (59aa)
Transcription regulator n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FGP9_9EURY
hypothetical protein
Transcription regulator {ECO:0000313|EMBL:ELZ34365.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.
qh_6_scaffold_454_15
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11978..12688
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XDL9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY59830.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
hypothetical protein
qh_6_scaffold_454_16
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12729..13319
DNA (591bp) protein (197aa)
Uncharacterized protein n=2 Tax=Halorubrum distributum RepID=M0EB57_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ51005.1}; TaxID=1227468 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum JCM 1011
hypothetical protein
qh_6_scaffold_454_17
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13652..14173)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JDA0_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ17253.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qh_6_scaffold_454_18
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14170..14397)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQV1_HALUD
Uncharacterized protein {ECO:0000313|EMBL:KDE57062.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
hypothetical protein
qh_6_scaffold_454_19
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14435..15178)
DNA (744bp) protein (248aa)
DNA polymerase sliding clamp n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=PCNA_NATPD
pcn; DNA polymerase sliding clamp
DNA polymerase sliding clamp {ECO:0000255|HAMAP-Rule:MF_00317}; Proliferating cell nuclear antigen homolog {ECO:0000255|HAMAP-Rule:MF_00317}; Short=PCNA {ECO:0000255|HAMAP-Rule:MF_00317};; TaxID=34878
qh_6_scaffold_454_20
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15271..16281)
DNA (1011bp) protein (337aa)
Replication factor C small subunit 2 n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W6P1_9EURY
replication factor C small subunit 2
Replication factor C small subunit 2 {ECO:0000313|EMBL:AGN00498.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp.
qh_6_scaffold_454_21
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16307..16975
DNA (669bp) protein (223aa)
gpmB; fructose-2,6-bisphosphatase; phosphoglyceromutase, type 2 (EC:5.4.2.1 3.1.3.46)
Fructose-2,6-bisphosphatase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4L0_9EURY
Fructose-2,6-bisphosphatase {ECO:0000313|EMBL:EMA52877.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensi
qh_6_scaffold_454_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16972..17883)
DNA (912bp) protein (304aa)
tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEN0_9EURY
tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase {ECO:0000313|EMBL:EMA55145.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
qh_6_scaffold_454_23
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17959..18576
DNA (618bp) protein (206aa)
Conserved hypothetical ferritin-like protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PFY3_9EURY
conserved hypothetical ferritin-like protein
Conserved hypothetical ferritin-like protein {ECO:0000313|EMBL:CCQ34207.1}; Rubrerythrin domain containing protein {ECO:0000313|EMBL:ERJ07297.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobac
qh_6_scaffold_454_24
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18573..19250)
DNA (678bp) protein (226aa)
Signal peptidase I n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QXQ2_9EURY
Signal peptidase I {ECO:0000313|EMBL:EFW90603.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX
peptidase S26B, signal peptidase
qh_6_scaffold_454_25
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19330..19554
DNA (225bp) protein (75aa)
polA1; DNA polymerase II small subunit (EC:2.7.7.7)
DNA polymerase II small subunit {ECO:0000256|HAMAP-Rule:MF_00325}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00325};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00325};; TaxID=348780 species="Archaea; Euryar
DNA-directed DNA polymerase D exonuclease subunit DP1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU51_NATPD
Displaying 25 items

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