ggKbase home page

qh_6_scaffold_463

Search features with annotation key words

Displaying 27 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_463_1
unknown

Not on your lists

768..1223
DNA (456bp) protein (152aa)

This feature has no annotations

qh_6_scaffold_463_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1345..2238)
DNA (894bp) protein (298aa)
argF; ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase, catabolic {ECO:0000256|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109};; TaxID=268739 species="Archa
Ornithine carbamoyltransferase, catabolic n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XK86_NATM8
qh_6_scaffold_463_3
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2298..3746)
DNA (1449bp) protein (483aa)
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_0000
Argininosuccinate lyase n=2 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J512_HALJB
qh_6_scaffold_463_4
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3747..5036)
DNA (1290bp) protein (430aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000313|EMBL:ELY64086.1}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000313|EMBL:ELY64086.1};; Citrulline--aspartate ligase {ECO
argG; argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XRQ7_9EURY
qh_6_scaffold_463_5
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5320..5496
DNA (177bp) protein (59aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IC97_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG02484.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
qh_6_scaffold_463_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5520..6005
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNH2_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ35460.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qh_6_scaffold_463_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6002..7444)
DNA (1443bp) protein (481aa)
rad3b; DNA repair helicase Rad3 (EC:3.6.4.12)
DNA repair helicase Rad3 {ECO:0000313|EMBL:CCQ37987.1}; EC=3.6.4.12 {ECO:0000313|EMBL:CCQ37987.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natro
DNA repair helicase Rad3 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTW6_NATM8
qh_6_scaffold_463_8
uncultured_archaeon_J07HX5, HalobacterialesCP, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7473..8054
DNA (582bp) protein (194aa)
id=24654232 bin=uncultured_archaeon_J07HX5 tax=uncultured_archaeon_J07HX5
id=24654232 bin=uncultured_archaeon_J07HX5 tax=uncultured_archaeon_J07HX5
qh_6_scaffold_463_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8228..9187)
DNA (960bp) protein (320aa)
Cation diffusion facilitator family transporter n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBU7_9EURY
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EMA55028.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
cation diffusion facilitator family transporter
qh_6_scaffold_463_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9246..9767
DNA (522bp) protein (174aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D253_9EURY
hypothetical protein
qh_6_scaffold_463_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9828..10559)
DNA (732bp) protein (244aa)
ArsR family transcription regulator n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU63_NATPD
transcription regulator
ArsR family transcription regulator {ECO:0000313|EMBL:CAI48320.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas p
qh_6_scaffold_463_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10635..10763
DNA (129bp) protein (43aa)
Uncharacterized protein {ECO:0000313|EMBL:CAI48319.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qh_6_scaffold_463_13
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10760..11764)
DNA (1005bp) protein (335aa)
Threonine aldolase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N9B8_9EURY
Threonine aldolase {ECO:0000313|EMBL:EMA54168.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 135
Threonine aldolase
qh_6_scaffold_463_14
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11844..12932
DNA (1089bp) protein (363aa)
Aminopeptidase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LR87_HALJP
peptidase M29 aminopeptidase II
Aminopeptidase {ECO:0000313|EMBL:EMA34555.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.;"
qh_6_scaffold_463_trna_1
unknown

Not on your lists

comp(13054..13129)
DNA (76bp)
transferRNA
qh_6_scaffold_463_15
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13222..13854
DNA (633bp) protein (211aa)
phosphoserine phosphatase (EC:3.1.3.3); K01079 phosphoserine phosphatase [EC:3.1.3.3] id=24620741 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
phosphoserine phosphatase SerB
Phosphoserine phosphatase SerB {ECO:0000313|EMBL:ERH02658.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
qh_6_scaffold_463_16
unknown

Not on your lists

13994..14215
DNA (222bp) protein (74aa)

This feature has no annotations

qh_6_scaffold_463_17
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14254..15120
DNA (867bp) protein (289aa)
MaoC family protein n=2 Tax=Haloarcula hispanica RepID=G0HT12_HALHT
maoC4; MaoC family protein
Acyl dehydratase {ECO:0000313|EMBL:AJF26016.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
qh_6_scaffold_463_18
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15181..16701)
DNA (1521bp) protein (507aa)
NAD-dependent aldehyde dehydrogenase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CV12_9EURY
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:ELZ26262.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometric
aldehyde dehydrogenase
qh_6_scaffold_463_19

Not on your lists

16785..17471
DNA (687bp) protein (229aa)
Putative DNA binding protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XXW3_9ARCH
Putative DNA binding protein {ECO:0000313|EMBL:ESS05086.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
Bacterio-opsin activator HTH domain protein
qh_6_scaffold_463_20
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17518..18765
DNA (1248bp) protein (416aa)
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein id=24616193 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ESP87861.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Can
extracellular ligand-binding receptor
qh_6_scaffold_463_21
unknown

Not on your lists

comp(18716..19264)
DNA (549bp) protein (183aa)

This feature has no annotations

qh_6_scaffold_463_22
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19665..20834
DNA (1170bp) protein (390aa)
Inner-membrane translocator n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HCU2_9EURY
Inner-membrane translocator {ECO:0000313|EMBL:ESP87863.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Ha
inner-membrane translocator
qh_6_scaffold_463_23
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20827..21633
DNA (807bp) protein (269aa)
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein id=24616196 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
ABC transporter {ECO:0000313|EMBL:ESP87864.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum tyrr
ABC transporter
qh_6_scaffold_463_24
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21630..22250
DNA (621bp) protein (207aa)
ABC transporter n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HB02_9EURY
ABC transporter {ECO:0000313|EMBL:ESP87865.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum tyrr
ABC transporter
qh_6_scaffold_463_25
Micromonas sp. RCC299, Micromonas, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

22253..23356
DNA (1104bp) protein (368aa)
Putative uncharacterized protein n=1 Tax=Micromonas sp. (strain RCC299 / NOUM17) RepID=C1E2X0_MICSR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO61987.1}; TaxID=296587 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas.;" source="Mic
qh_6_scaffold_463_26
Vitis vinifera, Vitis, Vitales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(23720..23989)
DNA (270bp) protein (90aa)
Acyl carrier protein n=1 Tax=Vitis vinifera RepID=D7SPM4_VITVI
Acyl carrier protein {ECO:0000256|RuleBase:RU000722}; TaxID=29760 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
acyl carrier protein
Displaying 27 items

View Taxonomy