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qh_6_scaffold_529

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_529_1
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..399
DNA (399bp) protein (133aa)
imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-)
Imidazoleglycerol phosphate synthase, cyclase subunit (Fragment) n=1 Tax=halophilic archaeon J07HB67 RepID=U1PNM3_9EURY
Imidazoleglycerol phosphate synthase, cyclase subunit {ECO:0000313|EMBL:ERH11749.1}; Flags: Fragment;; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophili
qh_6_scaffold_529_2
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(571..855)
DNA (285bp) protein (95aa)
DNA-directed RNA polymerase subunit L {ECO:0000256|HAMAP-Rule:MF_00261}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00261};; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
rpoL; DNA-directed RNA polymerase subunit L (EC:2.7.7.6)
DNA-directed RNA polymerase subunit L n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M148_9EURY
qh_6_scaffold_529_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1104..3056
DNA (1953bp) protein (651aa)
hbd_2; 3-hydroxyacyl-CoA dehydrogenase 2/enoyl-CoA hydratase I 2 (EC:1.1.1.35 4.2.1.17)
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase {ECO:0000313|EMBL:CAI49468.1}; EC=1.1.1.35 {ECO:0000313|EMBL:CAI49468.1};; EC=4.2.1.17 {ECO:0000313|EMBL:CAI49468.1};; TaxID=348780 species="Archa
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQX6_NATPD
qh_6_scaffold_529_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3058..3477
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQX5_NATPD
hypothetical protein
PaaI family protein {ECO:0000313|EMBL:CAI49469.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
qh_6_scaffold_529_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3509..3847)
DNA (339bp) protein (113aa)
Probable transcription factor (Homolog to RNA polymerase III subunit RPC34) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQX2_NATPD
hypothetical protein
Probable transcription factor (Homolog to RNA polymerase III subunit RPC34) {ECO:0000313|EMBL:CAI49472.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
qh_6_scaffold_529_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3872..4654)
DNA (783bp) protein (261aa)
NRDE domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQX1_NATPD
hypothetical protein
NRDE domain protein {ECO:0000313|EMBL:CAI49473.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
qh_6_scaffold_529_7
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4694..6181)
DNA (1488bp) protein (496aa)
2-succinylbenzoate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_00731}; EC=6.2.1.26 {ECO:0000256|HAMAP-Rule:MF_00731};; o-succinylbenzoyl-CoA synthetase {ECO:0000256|HAMAP-Rule:MF_00731}; TaxID=662480 speci
menE; O-succinylbenzoic acid--CoA ligase (EC:6.2.1.26)
O-succinylbenzoic acid--CoA ligase n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0IPC5_9EURY
qh_6_scaffold_529_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6174..7031)
DNA (858bp) protein (286aa)
o-succinylbenzoate synthase {ECO:0000256|HAMAP-Rule:MF_00470}; Short=OSB synthase {ECO:0000256|HAMAP-Rule:MF_00470};; Short=OSBS {ECO:0000256|HAMAP-Rule:MF_00470};; EC=4.2.1.113 {ECO:0000256|HAMAP-Rul
menC; O-succinylbenzoate synthase (EC:4.2.1.-)
Chloromuconate cycloisomerase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CM43_9EURY
qh_6_scaffold_529_9
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7122..8057)
DNA (936bp) protein (312aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};;
1,4-dihydroxy-2-naphthoate octaprenyltransferase n=2 Tax=Haloarcula hispanica RepID=G0HRA9_HALHT
1,4-dihydroxy-2-naphthoate prenyltransferase
qh_6_scaffold_529_10
unknown

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8572..9642
DNA (1071bp) protein (357aa)

This feature has no annotations

qh_6_scaffold_529_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9960..12170)
DNA (2211bp) protein (737aa)
Putative nuclease/nucleic acid binding OB-fold tRNA/helicase-type n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQF7_9EURY
Putative nuclease/nucleic acid binding OB-fold tRNA/helicase-type {ECO:0000313|EMBL:ELZ25471.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimp
RecJ domain protein
qh_6_scaffold_529_12
unknown

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comp(12225..12425)
DNA (201bp) protein (67aa)

This feature has no annotations

qh_6_scaffold_529_13
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12755..13576
DNA (822bp) protein (274aa)
Succinylglutamate desuccinylase/aspartoacylase family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSU3_NATM8
succinylglutamate desuccinylase/aspartoacylase family protein
Succinylglutamate desuccinylase/aspartoacylase family protein {ECO:0000313|EMBL:CCQ37455.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas
qh_6_scaffold_529_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13573..14304)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CAM3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20290.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_6_scaffold_529_15
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14305..15072)
DNA (768bp) protein (256aa)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Halobacterium sp. DL1 RepID=G4ID75_9EURY
Short-chain dehydrogenase {ECO:0000313|EMBL:AHG03944.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;
short-chain dehydrogenase/reductase SDR
qh_6_scaffold_529_16
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(15111..15560)
DNA (450bp) protein (150aa)
UPF0179 protein C448_15381 n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0LZA7_HALMO
UPF0179 protein C448_15381 {ECO:0000256|HAMAP-Rule:MF_00498}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae D
hypothetical protein
qh_6_scaffold_529_17
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15618..15998)
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HT65_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM57281.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain
qh_6_scaffold_529_18
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16078..16452
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TXQ7_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF27184.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
qh_6_scaffold_529_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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16500..17816
DNA (1317bp) protein (439aa)
Deoxyribodipyrimidine photolyase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZW4_9EURY
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:EMA50838.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifod
phr_2; deoxyribodipyrimidine photolyase
Displaying 19 items

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