ggKbase home page

qh_6_scaffold_999

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_999_1
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..679)
DNA (678bp) protein (226aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TWJ5_9EURY
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EMA22366.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
qh_6_scaffold_999_2
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(782..1141)
DNA (360bp) protein (120aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LMT1_HALLT
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ACM56669.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprof
qh_6_scaffold_999_3
unknown

Not on your lists

1342..1758
DNA (417bp) protein (139aa)

This feature has no annotations

qh_6_scaffold_999_4
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1606..1959)
DNA (354bp) protein (118aa)
Uncharacterized protein n=5 Tax=Halorubrum RepID=M0DNW8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ53117.1}; TaxID=1227468 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum JCM 1011
hypothetical protein
qh_6_scaffold_999_5
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2014..3315)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JIJ1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA08178.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans ATCC 3596
hypothetical protein
qh_6_scaffold_999_6
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(3344..4417)
DNA (1074bp) protein (358aa)
# 55938 # 56963 # -1 # ;gc_cont=0.520 id=18314086 bin=Nanosalina tax=Nanosalina
Uncharacterized protein {ECO:0000313|EMBL:EGQ44142.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
qh_6_scaffold_999_7
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4679..5119
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JHV0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN61296.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
qh_6_scaffold_999_8
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5110..6270)
DNA (1161bp) protein (387aa)
UDP-sulfoquinovose synthase n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CDZ0_9EURY
UDP-sulfoquinovose synthase {ECO:0000313|EMBL:ELZ21470.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM
UDP-sulfoquinovose synthase
qh_6_scaffold_999_9
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6358..7113
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0STT3_9EURY
hypothetical protein
DUF4330 family protein {ECO:0000313|EMBL:CAP12964.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (s
qh_6_scaffold_999_10
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7110..7508
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LM80_HALWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC41200.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
qh_6_scaffold_999_11
unknown

Not on your lists

comp(7529..7672)
DNA (144bp) protein (48aa)

This feature has no annotations

qh_6_scaffold_999_12
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7962..8213
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LHU8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA33101.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hypothetical protein
qh_6_scaffold_999_13
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8200..8433)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0GTJ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ75510.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
qh_6_scaffold_999_14
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8469..10253)
DNA (1785bp) protein (595aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|H
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KDG8_9EURY
glucosamine-fructose-6-phosphate aminotransferase
qh_6_scaffold_999_15
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10253..11443)
DNA (1191bp) protein (397aa)
Nucleotidyl transferase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MS82_HALMO
Nucleotidyl transferase {ECO:0000313|EMBL:EMA48471.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
nucleotidyl transferase
qh_6_scaffold_999_16
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11483..11707)
DNA (225bp) protein (75aa)
Uncharacterized protein id=24615050 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP88558.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
qh_6_scaffold_999_17
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11783..13153
DNA (1371bp) protein (457aa)
Deoxyribodipyrimidine photolyase n=1 Tax=Halonotius sp. J07HN4 RepID=U1P970_9EURY
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:ERH06544.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.
FAD-binding protein
qh_6_scaffold_999_18
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13154..13948)
DNA (795bp) protein (265aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1227457 sp
Undecaprenyl-diphosphatase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N610_9EURY
Undecaprenyl-diphosphatase
qh_6_scaffold_999_19
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14037..14177
DNA (141bp) protein (47aa)
tRNA pseudouridine synthase Pus10 {ECO:0000256|HAMAP-Rule:MF_01893}; EC=5.4.99.- {ECO:0000256|HAMAP-Rule:MF_01893};; tRNA pseudouridine 54/55 synthase {ECO:0000256|HAMAP-Rule:MF_01893}; TaxID=485914 s
tRNA pseudouridine synthase Pus10 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3R6_HALMD
THUMP domain-containing protein
Displaying 19 items

View Taxonomy