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qh_6_scaffold_1166

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_1166_1
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..1601)
DNA (1599bp) protein (533aa)
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PGF0_9EURY
O-sialolycoprotein endopeptidase/protein kinase
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein {ECO:0000256|HAMAP-Rule:MF_01447}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
qh_6_scaffold_1166_2
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1699..2199
DNA (501bp) protein (167aa)
Uncharacterized protein n=2 Tax=Haloarcula RepID=Q5UYA6_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA15362.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
qh_6_scaffold_1166_3
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(2206..2340)
DNA (135bp) protein (45aa)
30S ribosomal protein S27ae n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XV99_9EURY
30S ribosomal protein S27ae {ECO:0000256|HAMAP-Rule:MF_00777, ECO:0000313|EMBL:ELY65764.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" s
30S ribosomal protein S27a
qh_6_scaffold_1166_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2340..2648)
DNA (309bp) protein (103aa)
30S ribosomal protein S24e n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY38_9EURY
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545, ECO:0000256|RuleBase:RU004382}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.
rps24e; 30S ribosomal protein S24e
qh_6_scaffold_1166_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2889..3179
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR68_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25721.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_6_scaffold_1166_6
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3183..4049)
DNA (867bp) protein (289aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=662477 species="Archaea; Euryarchaeota;
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IY05_HALVA
inorganic polyphosphate/ATP-NAD kinase
qh_6_scaffold_1166_7
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4217..5635
DNA (1419bp) protein (473aa)
signal peptide peptidase SppA n=1 Tax=Halomicrobium katesii RepID=UPI0003644F42
signal peptide peptidase SppA, 36K type
Signal peptide peptidase SppA, 36K type {ECO:0000313|EMBL:ACV48933.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;
qh_6_scaffold_1166_8
unknown

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comp(5640..5756)
DNA (117bp) protein (39aa)

This feature has no annotations

qh_6_scaffold_1166_9

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6054..6641
DNA (588bp) protein (196aa)
PAS sensor histidine kinase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XSX8_9ARCH
PAS sensor histidine kinase {ECO:0000313|EMBL:ESS05288.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
boa; bacterio-opsin activator-like transcription regulator
qh_6_scaffold_1166_10
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6663..8552
DNA (1890bp) protein (630aa)
Bacterio-opsin activator-like transcription regulator n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0DM62_9EURY
Bacterio-opsin activator-like transcription regulator {ECO:0000313|EMBL:ELZ36571.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="H
boa; bacterio-opsin activator-like transcription regulator
qh_6_scaffold_1166_11
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8649..9077
DNA (429bp) protein (143aa)
PAS sensor histidine kinase {ECO:0000313|EMBL:ERG91064.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J0
boa; bacterio-opsin activator-like transcription regulator id=24628316 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
boa; bacterio-opsin activator-like transcription regulator
qh_6_scaffold_1166_12
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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9167..9439
DNA (273bp) protein (91aa)
CopG family transcriptional regulator n=2 Tax=Halorubrum distributum RepID=M0EPJ5_9EURY
CopG family transcriptional regulator {ECO:0000313|EMBL:EMA58788.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litore
putative CopG family transcriptional regulator
qh_6_scaffold_1166_13
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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9432..9716
DNA (285bp) protein (95aa)
Cytotoxic translational repressor of toxin-antitoxin stability system n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1N1A6_9EURY
Cytotoxic translational repressor of toxin-antitoxin stability system {ECO:0000313|EMBL:ERG90250.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloqua
hypothetical protein
qh_6_scaffold_1166_14
unknown

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comp(9733..9858)
DNA (126bp) protein (42aa)

This feature has no annotations

qh_6_scaffold_1166_15
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(10153..10428)
DNA (276bp) protein (92aa)
Putative transcriptional regulator n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JJF0_NATP1
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AGB31660.1}; Transcriptional regulator TrmB {ECO:0000313|EMBL:ELY73029.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales
qh_6_scaffold_1166_16
unknown

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comp(10859..11008)
DNA (150bp) protein (50aa)

This feature has no annotations

qh_6_scaffold_1166_17
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11018..11917)
DNA (900bp) protein (300aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; EC=2.3.3.16 {ECO:0000256|PIRNR:PIRNR001369};; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcu
citrate synthase (EC:2.3.3.1)
Citrate synthase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LL69_HALJP
qh_6_scaffold_1166_18
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(11881..12081)
DNA (201bp) protein (67aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; EC=2.3.3.16 {ECO:0000256|PIRNR:PIRNR001369};; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;"
2-methylcitrate synthase/citrate synthase II (EC:2.3.3.1)
Citrate synthase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LXB8_9EURY
qh_6_scaffold_1166_19
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12222..13430
DNA (1209bp) protein (403aa)
TrkA-C domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0I7_HALMD
TrkA-C domain-containing protein
TrkA-C domain protein {ECO:0000313|EMBL:ACV46969.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (s
qh_6_scaffold_1166_20
unknown

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comp(13282..13581)
DNA (300bp) protein (100aa)

This feature has no annotations

qh_6_scaffold_1166_21
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13639..14004)
DNA (366bp) protein (122aa)
Homolog to lactoylglutathione lyase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IR28_NATPD
glo_4; lyase/dioxygenase
Glyoxalase domain protein {ECO:0000313|EMBL:CAI49416.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (
qh_6_scaffold_1166_22
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(14229..14879)
DNA (651bp) protein (217aa)
Putative Zn-finger containing protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1PI92_9EURY
Putative Zn-finger containing protein {ECO:0000313|EMBL:ERH09824.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qh_6_scaffold_1166_23
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15031..15945
DNA (915bp) protein (305aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487};; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Malate dehydrogenase n=2 Tax=Haloarcula hispanica RepID=G0HUS6_HALHT
malate dehydrogenase
qh_6_scaffold_1166_24
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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16004..16222
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0J0P4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CQR49939.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
hypothetical protein
qh_6_scaffold_1166_25
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16219..17298
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TWZ5_9EURY
glcD; FAD/FMN-dependent dehydrogenase
FAD-linked oxidase {ECO:0000313|EMBL:AHZ23363.1}; FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:AFK19984.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacace
Displaying 25 items

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