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qh_6_scaffold_365

Search features with annotation key words

Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_365_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..571
DNA (570bp) protein (190aa)
exonuclease-like protein
hypothetical protein id=24647787 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Putative exonuclease {ECO:0000313|EMBL:ERH08915.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
qh_6_scaffold_365_2
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(704..1690)
DNA (987bp) protein (329aa)
Beta-lactamase n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WGA8_9EURY
Beta-lactamase {ECO:0000313|EMBL:ELY48505.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 10635.;"
beta-lactamase
qh_6_scaffold_365_3
unknown

Not on your lists

1759..2286
DNA (528bp) protein (176aa)

This feature has no annotations

qh_6_scaffold_365_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2384..2920
DNA (537bp) protein (179aa)
signal recognition particle n=1 Tax=Halomicrobium katesii RepID=UPI00036C4149
Suspect SCG annotation. See neighboring gene [qh_6_scaffold_365_5].
GTP-binding signal recognition particle SRP54 G-domain-containing protein
Signal recognition particle 54 kDa protein {ECO:0000256|HAMAP-Rule:MF_00306}; Short=SRP54 {ECO:0000256|HAMAP-Rule:MF_00306};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriale
qh_6_scaffold_365_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


2917..3705
DNA (789bp) protein (263aa)
Signal recognition particle 54 kDa protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1QRW1_9EURY
Signal recognition particle 54 kDa protein {ECO:0000256|HAMAP-Rule:MF_00306}; Short=SRP54 {ECO:0000256|HAMAP-Rule:MF_00306};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacterial
GTP-binding signal recognition particle SRP54 G-domain-containing protein
qh_6_scaffold_365_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3790..4269
DNA (480bp) protein (160aa)
Ribonuclease P protein component 2 {ECO:0000256|HAMAP-Rule:MF_00755}; Short=RNase P component 2 {ECO:0000256|HAMAP-Rule:MF_00755};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00755};; Pop5 {ECO:0000256|HA
Ribonuclease P protein component 2 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQH0_9EURY
ribonuclease P
qh_6_scaffold_365_7
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4272..5039
DNA (768bp) protein (256aa)
psmA4; proteasome subunit alpha (EC:3.4.25.1)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
Proteasome subunit alpha n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KSR7_HALAR
qh_6_scaffold_365_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


5132..5857
DNA (726bp) protein (242aa)
RNA-associated protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLK5_9EURY
RNA-associated protein {ECO:0000313|EMBL:ELZ24126.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9
RNA-associated protein
qh_6_scaffold_365_9
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5926..6975
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI0003749EAF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46677.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomi
qh_6_scaffold_365_10
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7023..8084)
DNA (1062bp) protein (354aa)
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (EC:2.1.1.14)
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase {ECO:0000313|EMBL:AEH38670.1}; EC=2.1.1.14 {ECO:0000313|EMBL:AEH38670.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobac
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D4D0_HALXS
qh_6_scaffold_365_11
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8081..9052)
DNA (972bp) protein (324aa)
Methionine synthase vitamin-B12 independent n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KJ81_9EURY
Methionine synthase vitamin-B12 independent {ECO:0000313|EMBL:EMA21417.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarc
Cobalamin-independent synthase MetE domain-containing protein
qh_6_scaffold_365_12
unknown

Not on your lists

comp(9111..9233)
DNA (123bp) protein (41aa)

This feature has no annotations

qh_6_scaffold_365_13
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9289..9660)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CS72_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26051.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
qh_6_scaffold_365_14
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9675..11642)
DNA (1968bp) protein (656aa)
Chaperone protein DnaK n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KLM7_HALAR
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
dnaK; molecular chaperone DnaK
qh_6_scaffold_365_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11713..12525)
DNA (813bp) protein (271aa)
Protein GrpE n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR18_9EURY
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacter
molecular chaperone GrpE
qh_6_scaffold_365_16
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12753..12941
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y0C2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY67485.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
qh_6_scaffold_365_17
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13035..14165)
DNA (1131bp) protein (377aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NVI1_HALBP
sugar ABC transporter ATP-binding protein
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:ADQ68865.1}; Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELY28707.1}; TaxID=469382 species="Archaea; Eur
qh_6_scaffold_365_18
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14379..16736)
DNA (2358bp) protein (786aa)
alpha-glucosidase (EC:3.2.1.-)
Alpha-glucosidase n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PJ16_9EURY
Alpha-glucosidase {ECO:0000313|EMBL:EMA69933.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 13916.;"
qh_6_scaffold_365_19
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16820..18079
DNA (1260bp) protein (420aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PMT7_9EURY
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:EMA70050.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorub
mandelate racemase/muconate lactonizing protein
qh_6_scaffold_365_20

Not on your lists

18181..19149
DNA (969bp) protein (323aa)
serA3; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
Lactate dehydrogenase related dehydrogenase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XFV0_9ARCH
Lactate dehydrogenase related dehydrogenase {ECO:0000313|EMBL:ESS06999.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
qh_6_scaffold_365_21
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(19192..20058)
DNA (867bp) protein (289aa)
ABC-type sugar transport system, permease component n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0KBM5_HALHC
Trehalose transport system permease protein SugB {ECO:0000313|EMBL:KJF16827.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" sour
ABC-type sugar transport system, permease component
qh_6_scaffold_365_22
Thermoanaerobacter sp. YS13, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20060..21019)
DNA (960bp) protein (320aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Thermoanaerobacter italicus (strain DSM 9252 / Ab9) RepID=D3T700_THEIA
ABC transporter permease {ECO:0000313|EMBL:KHO60967.1}; TaxID=1511746 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoan
binding-protein-dependent transporters inner membrane component
qh_6_scaffold_365_23
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21420..22436
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CJR2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22124.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
qh_6_scaffold_365_24
Haloferax sp. BAB2207, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22619..22927
DNA (309bp) protein (103aa)
Dehydratase n=1 Tax=Haloferax sp. BAB2207 RepID=L5N1W7_9EURY
Dehydratase {ECO:0000313|EMBL:ELK44611.1}; TaxID=1243180 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. BAB2207.;"
garD; dehydratase
qh_6_scaffold_365_25
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22938..24101
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Salsuginibacillus kocurii RepID=UPI0003683DA1
Uncharacterized protein {ECO:0000313|EMBL:KJS18889.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
carbohydrate hydrolase
qh_6_scaffold_365_26
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24110..25114
DNA (1005bp) protein (335aa)
(R)-2-hydroxyacid dehydrogenase n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YGH3_9EURY
(R)-2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:GAD53366.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-
malate dehydrogenase
qh_6_scaffold_365_27
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25233..26636
DNA (1404bp) protein (468aa)
Extracellular solute-binding protein, family 1 n=1 Tax=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) RepID=B9K7M3_THENN
sugar ABC transporter periplasmic sugar-binding protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
ABC transporter substrate-binding protein
qh_6_scaffold_365_28

Not on your lists

comp(26796..27683)
DNA (888bp) protein (296aa)
Dihydrodipicolinate synthase/N-acetylneuraminate lyase n=1 Tax=uncultured archaeon A07HR67 RepID=V4XVZ9_9ARCH
Dihydrodipicolinate synthase/N-acetylneuraminate lyase {ECO:0000313|EMBL:ESS04376.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
dihydrodipicolinate synthase/N-acetylneuraminate lyase
qh_6_scaffold_365_29
Methanothermobacter marburgensis, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

27772..29238
DNA (1467bp) protein (489aa)
aldehyde dehydrogenase (EC:1.2.1.-)
Aldehyde dehydrogenase {ECO:0000313|EMBL:ADL58950.1}; EC=1.2.1.- {ECO:0000313|EMBL:ADL58950.1};; TaxID=79929 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae;
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TU69_9EURY
qh_6_scaffold_365_30
Haloferax sp. ATCC BAA-644, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29253..30335)
DNA (1083bp) protein (361aa)
Xylose dehydrogenase (NAD/NADP) n=3 Tax=Haloferax RepID=M0FPT8_9EURY
Xylose dehydrogenase (NAD/NADP) {ECO:0000313|EMBL:ELZ70888.1}; TaxID=1227462 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. ATCC BAA-6
xylose dehydrogenase (NAD/NADP)
Displaying items 1-30 of 31 in total

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