ggKbase home page

qh_6_scaffold_849

Search features with annotation key words

Displaying 14 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_849_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3..821
DNA (819bp) protein (273aa)
Putative transcriptional regulator n=1 Tax=halophilic archaeon J07HX64 RepID=U1QRV7_9EURY
Putative transcriptional regulator {ECO:0000313|EMBL:ERH09918.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
putative transcriptional regulator
qh_6_scaffold_849_2
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1047..1730
DNA (684bp) protein (228aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000313|EMBL:ELZ27303.1}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_0
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXD3_9EURY
qh_6_scaffold_849_3
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1918..2625
DNA (708bp) protein (236aa)
UspA domain protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PA36_9EURY
UspA domain protein
UspA domain protein {ECO:0000313|EMBL:EMA66718.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
qh_6_scaffold_849_4
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2622..2825)
DNA (204bp) protein (68aa)
Amino acid transport protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P989_9EURY
Amino acid transport protein {ECO:0000313|EMBL:EMA66717.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 149
cat5; transport protein (probable substrate cationic amino acids)
qh_6_scaffold_849_5
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

3161..4078
DNA (918bp) protein (306aa)
Uncharacterized protein {ECO:0000313|EMBL:KIJ70891.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
qh_6_scaffold_849_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4047..4421)
DNA (375bp) protein (125aa)
NUDIX hydrolase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR08_9EURY
NUDIX hydrolase {ECO:0000313|EMBL:ELZ25695.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
NUDIX hydrolase
qh_6_scaffold_849_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


4568..4927
DNA (360bp) protein (120aa)
30S ribosomal protein S10 id=24649826 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
30S ribosomal protein S10
qh_6_scaffold_849_8
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4984..5556)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AKJ9_NATGS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ73570.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium gregoryi (s
qh_6_scaffold_849_9
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5619..6416
DNA (798bp) protein (266aa)
S-adenosylmethionine hydroxide adenosyltransferase family protein n=2 Tax=Halobacterium salinarum RepID=B0R327_HALS3
hypothetical protein
S-adenosylmethionine hydroxide adenosyltransferase family protein {ECO:0000313|EMBL:CAP13137.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobact
qh_6_scaffold_849_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6449..8182)
DNA (1734bp) protein (578aa)
Transposase, IS605 OrfB family, central region n=1 Tax=halophilic archaeon J07HX64 RepID=U1QX80_9EURY
Transposase, IS605 OrfB family, central region {ECO:0000313|EMBL:ERH10522.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
transposase, IS605 OrfB family, central region
qh_6_scaffold_849_11
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8185..8364)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JU34_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB33901.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
qh_6_scaffold_849_12
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8493..9284)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LHW3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA31580.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hypothetical protein
qh_6_scaffold_849_13
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9510..10295
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F7P2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ54639.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
qh_6_scaffold_849_14
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10420..11145)
DNA (726bp) protein (242aa)
metal-dependent membrane protease id=24644795 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Putative metal-dependent membrane protease {ECO:0000313|EMBL:ERH09010.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
Displaying 14 items

View Taxonomy