ggKbase home page

qh_6_scaffold_158

Search features with annotation key words

Displaying 26 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_158_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..218)
DNA (216bp) protein (72aa)
CRISPR-associated protein Csh2 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBC8_9EURY
CRISPR-associated protein Csh2 {ECO:0000313|EMBL:EMA54399.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
CRISPR-associated protein, Csh2 family
qh_6_scaffold_158_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(215..2215)
DNA (2001bp) protein (667aa)
Crispr-associated protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCJ7_9EURY
Crispr-associated protein {ECO:0000313|EMBL:EMA54400.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DS
qh_6_scaffold_158_3
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2212..2952)
DNA (741bp) protein (247aa)
CRISPR-associated protein Cas6 n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HIZ1_9EURY
CRISPR-associated protein Cas6 {ECO:0000313|EMBL:ELZ84461.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC
CRISPR-associated protein Cas6
qh_6_scaffold_158_4
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3099..4217)
DNA (1119bp) protein (373aa)
Aminoglycoside phosphotransferase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QU81_9EURY
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ADJ15860.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicocc
qh_6_scaffold_158_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4553..5767
DNA (1215bp) protein (405aa)
Acyl-CoA dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N655_9EURY
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EMA53361.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8
acyl-CoA dehydrogenase
qh_6_scaffold_158_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6260..7399)
DNA (1140bp) protein (380aa)
CBS domain-containing membrane protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLE0_9EURY
CBS domain-containing membrane protein {ECO:0000313|EMBL:ELZ23187.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex
CBS domain containing membrane protein
qh_6_scaffold_158_7
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7440..7925
DNA (486bp) protein (162aa)
Lycopene cyclase domain-containing protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L5D4_9EURY
Lycopene cyclase domain-containing protein {ECO:0000313|EMBL:EMA27200.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma la
lycopene cyclase
qh_6_scaffold_158_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8054..8848
DNA (795bp) protein (265aa)
NAD-dependent protein deacetylase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N661_9EURY
NAD-dependent protein deacetylase {ECO:0000313|EMBL:EMA53366.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifo
NAD-dependent protein deacetylase
qh_6_scaffold_158_9
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8975..9376
DNA (402bp) protein (134aa)
Cupin n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N2G9_9EURY
Cupin {ECO:0000313|EMBL:EMA52041.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552.;"
cupin
qh_6_scaffold_158_10
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9879..10127
DNA (249bp) protein (83aa)
Amino acid permease n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JR94_NATP1
amino acid transporter
Amino acid permease {ECO:0000313|EMBL:ELY71682.1}; Amino acid transporter {ECO:0000313|EMBL:AGB33313.1}; Flags: Precursor;; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Na
qh_6_scaffold_158_11
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10221..11444
DNA (1224bp) protein (408aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3ST91_NATMM
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AHG02150.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.;
qh_6_scaffold_158_12
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11612..12370)
DNA (759bp) protein (253aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BWC6_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ELZ15265.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
qh_6_scaffold_158_13
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12608..13747
DNA (1140bp) protein (380aa)
Acyl-CoA dehydrogenase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NWK4_HALBP
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ADQ69424.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
qh_6_scaffold_158_14
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13963..14976
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WM01_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY50417.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
3-hydroxy-3-methylglutaryl CoA synthase
qh_6_scaffold_158_15
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14976..15434
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WMG0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY50416.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
qh_6_scaffold_158_16
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15431..16606
DNA (1176bp) protein (392aa)
Thiolase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WLR1_9EURY
Thiolase {ECO:0000313|EMBL:ELY50415.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongolicus JCM 12255
acetyl-CoA acetyltransferase
qh_6_scaffold_158_17
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16876..17679
DNA (804bp) protein (268aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WMD8_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ELY50396.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimn
short-chain dehydrogenase/reductase SDR
qh_6_scaffold_158_18
unknown

Not on your lists

18031..18219
DNA (189bp) protein (63aa)

This feature has no annotations

qh_6_scaffold_158_19
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18553..19572
DNA (1020bp) protein (340aa)
BNR repeat-containing glycosyl hydrolase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZV2_9EURY
BNR repeat-containing glycosyl hydrolase {ECO:0000313|EMBL:EMA37655.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
glycosyl hydrolase
qh_6_scaffold_158_20
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19701..20516
DNA (816bp) protein (272aa)
Thioredoxin reductase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J650_HALJB
thioredoxin reductase
Thioredoxin reductase {ECO:0000313|EMBL:ADJ15768.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali
qh_6_scaffold_158_21
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20585..22267)
DNA (1683bp) protein (561aa)
Spermidine synthase n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IGT1_9EURY
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=66
spermine/spermidine synthase family protein
qh_6_scaffold_158_22
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22545..23501
DNA (957bp) protein (319aa)
GTP-binding protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J7N0_HALJB
GTP-binding protein
GTP-binding protein {ECO:0000313|EMBL:ADJ16050.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (s
qh_6_scaffold_158_23
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23489..25093)
DNA (1605bp) protein (535aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LVW3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA37591.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qh_6_scaffold_158_24
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25216..25833
DNA (618bp) protein (206aa)
GTP-binding protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NBN3_9EURY
GTP-binding protein {ECO:0000313|EMBL:EMA54070.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13
engB; GTP-binding protein EngB
qh_6_scaffold_158_25
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26263..27288)
DNA (1026bp) protein (342aa)
Putative mechanosensitive ion channel n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N161_9EURY
Putative mechanosensitive ion channel {ECO:0000313|EMBL:EMA51288.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
mechanosensitive ion channel protein MscS
qh_6_scaffold_158_26
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27294..27539)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MPZ4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46809.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
Displaying 26 items

View Taxonomy