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qh_6_scaffold_304

Search features with annotation key words

Displaying items 1-30 of 42 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_304_1
unknown

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2..76
DNA (75bp) protein (25aa)

This feature has no annotations

qh_6_scaffold_304_2
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

143..1597
DNA (1455bp) protein (485aa)
menF; menaquinone-specific isochorismate synthase (EC:5.4.4.2)
Menaquinone-specific isochorismate synthase n=2 Tax=Haloarcula RepID=M0JS89_9EURY
Menaquinone-specific isochorismate synthase {ECO:0000313|EMBL:EMA13585.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcu
qh_6_scaffold_304_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1601..3469
DNA (1869bp) protein (623aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNX8_9EURY
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
qh_6_scaffold_304_4
unknown

Not on your lists

3618..3737
DNA (120bp) protein (40aa)

This feature has no annotations

qh_6_scaffold_304_5
unknown

Not on your lists

comp(3680..3808)
DNA (129bp) protein (43aa)

This feature has no annotations

qh_6_scaffold_304_6
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3881..4555)
DNA (675bp) protein (225aa)
binding-protein-dependent transport systems inner membrane component; K05845 osmoprotectant transport system substrate-binding protein; K05846 osmoprotectant transport system permease protein id=24626985 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
ABC-type proline/glycine betaine transport system, permease component {ECO:0000313|EMBL:ERG98690.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloqua
binding-protein-dependent transport systems inner membrane component
qh_6_scaffold_304_7
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4557..5579)
DNA (1023bp) protein (341aa)
ABC transporter n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XRM2_9EURY
ABC transporter {ECO:0000313|EMBL:ELY63283.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
ABC transporter
qh_6_scaffold_304_8
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5576..6295)
DNA (720bp) protein (240aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XNA7_9EURY
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ELY63284.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.
binding-protein-dependent transport systems inner membrane component
qh_6_scaffold_304_9
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6300..7253)
DNA (954bp) protein (318aa)
Glycine/betaine ABC transporter substrate-binding protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XNF8_9EURY
Glycine/betaine ABC transporter substrate-binding protein {ECO:0000313|EMBL:ELY63285.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="
glycine/betaine ABC transporter substrate-binding protein
qh_6_scaffold_304_10
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7535..8533
DNA (999bp) protein (333aa)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=1227452 spec
crotonase (EC:4.1.3.36)
Naphthoate synthase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KNY5_9EURY
qh_6_scaffold_304_11
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8754..9098
DNA (345bp) protein (115aa)
Glutaredoxin-like protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LYA2_9EURY
Glutaredoxin-like protein {ECO:0000313|EMBL:EMA38426.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 1
glutaredoxin-like protein
qh_6_scaffold_304_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9218..9829
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M200_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA38425.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qh_6_scaffold_304_13
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10080..10274
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EEV1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ46321.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
transcription regulator
qh_6_scaffold_304_14
unknown

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comp(10604..10750)
DNA (147bp) protein (49aa)

This feature has no annotations

qh_6_scaffold_304_15
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10747..11046)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M291_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39947.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
conserved hypothetical protein (DUF433)
qh_6_scaffold_304_16
unknown

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comp(11115..11381)
DNA (267bp) protein (89aa)

This feature has no annotations

qh_6_scaffold_304_17
unknown

Not on your lists

comp(11392..11556)
DNA (165bp) protein (55aa)

This feature has no annotations

qh_6_scaffold_304_18
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11804..12775
DNA (972bp) protein (324aa)
Phosphoadenosine phosphosulfate reductase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LAW3_9EURY
Phosphoadenosine phosphosulfate reductase {ECO:0000313|EMBL:EMA30726.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lac
phosphoadenosine phosphosulfate reductase
qh_6_scaffold_304_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13101..13835)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUD0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26836.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_6_scaffold_304_20
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14099..14743
DNA (645bp) protein (215aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
thiE; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HDM5_9EURY
qh_6_scaffold_304_21
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14740..15609
DNA (870bp) protein (290aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000313|EMBL:ELZ83179.1}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAM
thiM; hydroxyethylthiazole kinase (EC:2.7.1.50)
Hydroxyethylthiazole kinase n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HJB1_9EURY
qh_6_scaffold_304_22
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15789..16484)
DNA (696bp) protein (232aa)
3-beta hydroxysteroid dehydrogenase/isomerase family protein n=2 Tax=Haloarcula hispanica RepID=G0I0H4_HALHT
3-beta hydroxysteroid dehydrogenase/isomerase family protein
3-beta hydroxysteroid dehydrogenase {ECO:0000313|EMBL:AHB68243.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hisp
qh_6_scaffold_304_23
unknown

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comp(17216..17359)
DNA (144bp) protein (48aa)

This feature has no annotations

qh_6_scaffold_304_24
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17411..18145)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KVQ4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA23810.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
hypothetical protein
qh_6_scaffold_304_25
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18340..19734)
DNA (1395bp) protein (465aa)
ATPase n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0A4M7_9EURY
ATPase {ECO:0000313|EMBL:ELY92308.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeirensis JCM 10989.;"
ATPase
qh_6_scaffold_304_26
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19979..20389
DNA (411bp) protein (137aa)
Superfamily II DNA/RNA helicase, SNF2 family n=1 Tax=halophilic archaeon J07HX64 RepID=U1P2T8_9EURY
Superfamily II DNA/RNA helicase, SNF2 family {ECO:0000313|EMBL:ERH10995.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
helicase
qh_6_scaffold_304_27
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20382..21560
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VRP3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY39834.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;
hypothetical protein
qh_6_scaffold_304_trna_1
unknown

Not on your lists

comp(21728..21866)
DNA (139bp)
transferRNA
qh_6_scaffold_304_28
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22223..22471
DNA (249bp) protein (83aa)
GntR family transcriptional regulator n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HQG4_9EURY
GntR family transcriptional regulator {ECO:0000313|EMBL:ESP90159.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Can
transcriptional regulator with HTH domain and aminotransferase domain
qh_6_scaffold_304_29
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22590..23420
DNA (831bp) protein (277aa)
GntR family transcriptional regulator {ECO:0000313|EMBL:ESP90159.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Can
GntR family transcriptional regulator id=24613525 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
GntR family transcriptional regulator
Displaying items 1-30 of 42 in total

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