ggKbase home page

qh_6_scaffold_1156

Search features with annotation key words

Displaying items 1-30 of 33 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_1156_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..455)
DNA (453bp) protein (151aa)
IclR-like transcriptional regulator n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAC7_9EURY
IclR-like transcriptional regulator {ECO:0000313|EMBL:EMA42701.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
qh_6_scaffold_1156_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(644..1318)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC02_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55093.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qh_6_scaffold_1156_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1917..4073)
DNA (2157bp) protein (719aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1227456 species="Archaea
NAD-dependent DNA ligase (EC:6.5.1.2)
NAD-dependent DNA ligase LigA n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAV6_9EURY
qh_6_scaffold_1156_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4218..4469)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N676_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52195.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qh_6_scaffold_1156_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4633..6450)
DNA (1818bp) protein (606aa)
Probable translation initiation factor IF-2 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2U9_9EURY
Probable translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
translation initiation factor eaIF-5B
qh_6_scaffold_1156_6
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6524..7573)
DNA (1050bp) protein (350aa)
Brp-like protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LNF4_HALJP
Brp-like protein {ECO:0000313|EMBL:EMA33560.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.;"
blh; Brp-like protein-like
qh_6_scaffold_1156_7
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7564..8355)
DNA (792bp) protein (264aa)
lycopene cyclase n=1 Tax=Halomicrobium katesii RepID=UPI00037F68E7
lycopene cyclase domain-containing protein
Lycopene cyclase domain protein {ECO:0000313|EMBL:ACV47405.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muk
qh_6_scaffold_1156_8
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9276..10985)
DNA (1710bp) protein (570aa)
Bacterio-opsin activator n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J3G3_HALJB
bacterio-opsin activator
Bacterio-opsin activator {ECO:0000313|EMBL:ADJ15270.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotga
qh_6_scaffold_1156_9
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11217..11711)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CN55_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23309.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
qh_6_scaffold_1156_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11969..12265
DNA (297bp) protein (99aa)
PRC-barrel domain-containing protein n=2 Tax=Halococcus RepID=M0MEP5_9EURY
PRC-barrel domain-containing protein {ECO:0000313|EMBL:EMA52197.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sal
PRC-barrel domain-containing protein
qh_6_scaffold_1156_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12265..12723
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCQ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43133.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
DNA-binding protein
qh_6_scaffold_1156_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12746..13510)
DNA (765bp) protein (255aa)
CAAX amino terminal protease family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N500_9EURY
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EMA52199.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococ
CAAX amino terminal protease family protein
qh_6_scaffold_1156_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13593..14807)
DNA (1215bp) protein (405aa)
Probable glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473};; Phosphoglucose isomerase {ECO:000
phosphoglucose isomerase (PGI) (EC:5.3.1.9)
Probable glucose-6-phosphate isomerase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBK9_9EURY
qh_6_scaffold_1156_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14883..15479
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFD3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43130.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_6_scaffold_1156_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15476..16063
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEP0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43129.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_6_scaffold_1156_16
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16204..17763
DNA (1560bp) protein (520aa)
AAA ATPase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M7U0_9EURY
AAA ATPase {ECO:0000313|EMBL:EMA40684.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
pre-peptidase
qh_6_scaffold_1156_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17848..18705
DNA (858bp) protein (286aa)
Protein-export membrane protein SecF n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N685_9EURY
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
preprotein translocase subunit SecF
qh_6_scaffold_1156_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18702..19373
DNA (672bp) protein (224aa)
Protein-export membrane protein SecD n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEN5_9EURY
Protein-export membrane protein SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
secD; preprotein translocase subunit SecD
qh_6_scaffold_1156_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19375..20295
DNA (921bp) protein (307aa)
Protein-export membrane protein SecD n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEN5_9EURY
Protein-export membrane protein SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
secD; preprotein translocase subunit SecD
qh_6_scaffold_1156_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20577..20984)
DNA (408bp) protein (136aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052};; TaxID=1227456 species="Archaea; Euryarchaeota; H
Ribonuclease HII n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3T5_9EURY
ribonuclease HII
qh_6_scaffold_1156_21
unknown

Not on your lists

comp(21304..21444)
DNA (141bp) protein (47aa)

This feature has no annotations

qh_6_scaffold_1156_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21482..22960)
DNA (1479bp) protein (493aa)
tRNA pseudouridine synthase Pus10 {ECO:0000256|HAMAP-Rule:MF_01893}; EC=5.4.99.- {ECO:0000256|HAMAP-Rule:MF_01893};; tRNA pseudouridine 54/55 synthase {ECO:0000256|HAMAP-Rule:MF_01893}; TaxID=1227456
tRNA pseudouridine synthase Pus10 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2P2_9EURY
pseudouridylate synthase
qh_6_scaffold_1156_23
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23024..24535)
DNA (1512bp) protein (504aa)
Export protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEN0_9EURY
Export protein {ECO:0000313|EMBL:EMA43119.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.
rfbX; export protein
qh_6_scaffold_1156_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24769..25968
DNA (1200bp) protein (400aa)
Nucleotidyl transferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCP6_9EURY
Nucleotidyl transferase {ECO:0000313|EMBL:EMA43118.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
nucleotidyl transferase
qh_6_scaffold_1156_25
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26225..27187
DNA (963bp) protein (321aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|H
glmS1; glucosamine-fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2W6_9EURY
qh_6_scaffold_1156_26
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27184..27669
DNA (486bp) protein (162aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|H
glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBG6_9EURY
qh_6_scaffold_1156_27
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27787..28962
DNA (1176bp) protein (392aa)
UDP-sulfoquinovose synthase (EC:3.13.1.1)
UDP-sulfoquinovose synthase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MR82_9EURY
UDP-sulfoquinovose synthase {ECO:0000313|EMBL:EMA46965.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyti
qh_6_scaffold_1156_28
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28962..29885
DNA (924bp) protein (308aa)
UDP-glucose 4-epimerase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDA1_9EURY
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EMA55513.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
galE5; UDP-glucose 4-epimerase
qh_6_scaffold_1156_29
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29882..30880
DNA (999bp) protein (333aa)
UDP-glucose 4-epimerase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MNM3_9EURY
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EMA46963.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
galE7; UDP-glucose 4-epimerase
qh_6_scaffold_1156_30
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30881..31267)
DNA (387bp) protein (129aa)
UTP--glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NFS8_9EURY
Glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:EMA55515.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
Displaying items 1-30 of 33 in total

View Taxonomy