ggKbase home page

qh_6_scaffold_176

Search features with annotation key words

Displaying 28 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_176_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..725)
DNA (723bp) protein (241aa)
DNA polymerase II large subunit {ECO:0000256|HAMAP-Rule:MF_00324}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00324};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00324};; TaxID=1227455 species="Archaea; Eurya
DNA polymerase type II, large subunit (EC:2.7.7.7)
DNA polymerase II large subunit n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBQ1_9EURY
qh_6_scaffold_176_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(725..1147)
DNA (423bp) protein (141aa)
PolA operon protein ( DNA-binding protein) n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAF5_9EURY
PolA operon protein ( DNA-binding protein) {ECO:0000313|EMBL:EMA42772.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
polA operon protein ( DNA-binding protein)
qh_6_scaffold_176_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1229..3394)
DNA (2166bp) protein (722aa)
DEAD_2 domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAQ1_9EURY
DEAD_2 domain-containing protein {ECO:0000313|EMBL:EMA55027.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifod
DEAD_2 domain-containing protein
qh_6_scaffold_176_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3488..4432)
DNA (945bp) protein (315aa)
Cation diffusion facilitator family transporter n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBU7_9EURY
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EMA55028.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
putative Co/Zn/Cd cation transporter
qh_6_scaffold_176_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4524..5234)
DNA (711bp) protein (237aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0ND83_9EURY
hisH; imidazole glycerol phosphate synthase subunit HisH
qh_6_scaffold_176_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5335..6702)
DNA (1368bp) protein (456aa)
Phage SPO1 DNA polymerase-related protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0ND88_9EURY
Phage SPO1 DNA polymerase-related protein {ECO:0000313|EMBL:EMA55034.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
uracil-DNA glycosylase
qh_6_scaffold_176_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6988..7575)
DNA (588bp) protein (196aa)
UPF0215 protein C449_16498 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEB4_9EURY
UPF0215 protein C449_16498 {ECO:0000256|HAMAP-Rule:MF_00582}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
conserved hypothetical protein (DUF99)
qh_6_scaffold_176_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7576..7752)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDK9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42759.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_6_scaffold_176_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7846..8457
DNA (612bp) protein (204aa)
Hydrolase ( hydroxyacylglutathione hydrolase ) 8 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAR0_9EURY
Hydrolase ( hydroxyacylglutathione hydrolase ) 8 {ECO:0000313|EMBL:EMA55037.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Ha
beta-lactamase
qh_6_scaffold_176_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8889..9038)
DNA (150bp) protein (50aa)
50S ribosomal protein L40e n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ME54_9EURY
50S ribosomal protein L40e {ECO:0000256|HAMAP-Rule:MF_00788}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
rpl40e; 50S ribosomal protein L40e
qh_6_scaffold_176_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9083..9619)
DNA (537bp) protein (179aa)
Probable ribosome biogenesis protein C449_16178 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAC1_9EURY
Probable ribosome biogenesis protein C449_16178 {ECO:0000256|HAMAP-Rule:MF_01116}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source=
hypothetical protein
qh_6_scaffold_176_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9675..10586)
DNA (912bp) protein (304aa)
Malate dehydrogenase {ECO:0000313|EMBL:EMA42697.1}; EC=1.1.1.37 {ECO:0000313|EMBL:EMA42697.1};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococc
Malate dehydrogenase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MA77_9EURY
lactate/malate dehydrogenase
qh_6_scaffold_176_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10887..11540
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDA0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55049.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_6_scaffold_176_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11541..13985)
DNA (2445bp) protein (815aa)
eif4A; Hef nuclease/ATP-dependent RNA helicase-like protein eIF-4A (EC:3.6.1.-)
Hef nuclease n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NB33_9EURY
Hef nuclease {ECO:0000313|EMBL:EMA55051.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
qh_6_scaffold_176_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14058..14621)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBX0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55053.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_6_scaffold_176_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(14621..16432)
DNA (1812bp) protein (604aa)
Glycyl-tRNA ligase {ECO:0000313|EMBL:EMA55054.1}; EC=6.1.1.14 {ECO:0000313|EMBL:EMA55054.1};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus
glyS; glycyl-tRNA synthetase (EC:6.1.1.14)
Glycyl-tRNA ligase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDA2_9EURY
qh_6_scaffold_176_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16419..17276)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEG2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55055.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_6_scaffold_176_18
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17387..17920)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M684_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA40119.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qh_6_scaffold_176_19
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17963..18379)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N6B0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53068.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qh_6_scaffold_176_20
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18379..19773)
DNA (1395bp) protein (465aa)
Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MIU7_HALMO
Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA44370.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococc
dppF1; putative dipeptides/oligopeptides ABC transporter ATP-binding protein
qh_6_scaffold_176_21
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19766..20998)
DNA (1233bp) protein (411aa)
Oligopeptide/dipeptide ABC transporter ATPase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MI21_HALMO
Oligopeptide/dipeptide ABC transporter ATPase {ECO:0000313|EMBL:EMA44369.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloco
oligopeptide/dipeptide ABC transporter, ATP-binding protein
qh_6_scaffold_176_22
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20995..22464)
DNA (1470bp) protein (490aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N5D8_9EURY
Binding-protein-dependent transporters inner membrane component {ECO:0000313|EMBL:EMA53071.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcu
oppC; oligopeptide ABC transporter permease
qh_6_scaffold_176_23
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22469..22843)
DNA (375bp) protein (125aa)
Dipeptide ABC transporter permease n=1 Tax=Halogranum salarium B-1 RepID=J3JG74_9EURY
Dipeptide ABC transporter permease {ECO:0000313|EMBL:EJN59884.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
dppB1; putative dipeptides/oligopeptides ABC transporter permease
qh_6_scaffold_176_24
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23603..25294)
DNA (1692bp) protein (564aa)
Dipeptide ABC transporter dipeptide-binding protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MF68_HALMO
Dipeptide ABC transporter dipeptide-binding protein {ECO:0000313|EMBL:EMA44366.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
dppA1; putative dipeptides/oligopeptides ABC transporter periplasmic substrate-binding protein
qh_6_scaffold_176_25
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25809..25994
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBX7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55063.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_6_scaffold_176_26
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26036..26545)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDI4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42729.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_6_scaffold_176_27
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26847..28154
DNA (1308bp) protein (436aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1227456 species="Arch
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEG9_9EURY
qh_6_scaffold_176_28
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28156..28899
DNA (744bp) protein (248aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_0000
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAA8_9EURY
Displaying 28 items

View Taxonomy