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qh_6_scaffold_2032

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Displaying 11 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_2032_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(227..1342)
DNA (1116bp) protein (372aa)
NMD3 family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBG7_9EURY
NMD3 family protein {ECO:0000313|EMBL:EMA55317.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989
nonsense mediated mRNA decay-like protein
qh_6_scaffold_2032_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1455..2327
DNA (873bp) protein (291aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Protease HtpX homolog n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCL9_9EURY
heat shock protein HtpX
qh_6_scaffold_2032_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2518..3120
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDP8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42809.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_6_scaffold_2032_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3191..4513
DNA (1323bp) protein (441aa)
DNA repair and recombination protein RadA n=2 Tax=Halococcus saccharolyticus RepID=M0MBT6_9EURY
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
DNA repair and recombination protein RadA
qh_6_scaffold_2032_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4404..4823)
DNA (420bp) protein (140aa)
SUF system FeS assembly protein, NifU family n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAJ1_9EURY
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:EMA42807.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloco
SUF system FeS assembly protein, NifU family
qh_6_scaffold_2032_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4879..6126)
DNA (1248bp) protein (416aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloc
Cysteine desulfurase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBT4_9EURY
cysteine desulfurase, SufS subfamily
qh_6_scaffold_2032_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6185..6331)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAI6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42802.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_6_scaffold_2032_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6468..6809
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAM4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42801.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_6_scaffold_2032_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6818..7111)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEF6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42800.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_6_scaffold_2032_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7092..7937)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NF59_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55330.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
TPR repeat-containing protein
qh_6_scaffold_2032_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7991..8449
DNA (459bp) protein (153aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1227456 species="A
2'-5' RNA ligase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBT8_9EURY
2'-5' RNA ligase
Displaying 11 items

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