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qh_6_scaffold_275

Search features with annotation key words

Displaying items 1-30 of 50 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_275_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..352)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N182_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50864.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_6_scaffold_275_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(493..1098)
DNA (606bp) protein (202aa)
Putative MFS transporter n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MV26_9EURY
Putative MFS transporter {ECO:0000313|EMBL:EMA48639.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
putative MFS transporter
qh_6_scaffold_275_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1099..1347)
DNA (249bp) protein (83aa)
Putative MFS transporter n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MV26_9EURY
Putative MFS transporter {ECO:0000313|EMBL:EMA48639.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
major facilitator superfamily protein
qh_6_scaffold_275_4
Aureococcus anophagefferens, Aureococcus, Pelagomonadales, Pelagophyceae, Eukaryota

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1545..2447
DNA (903bp) protein (301aa)
PREDICTED: serine/arginine repetitive matrix protein 2-like n=1 Tax=Mesocricetus auratus RepID=UPI0003596073
LigA protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGB11868.1}; Flags: Fragment;; TaxID=44056 species="Eukaryota; Stramenopiles; Pelagophyceae; Pelagomonadales; Aureococcus.;" source="Aureococcus anop
qh_6_scaffold_275_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2507..3934
DNA (1428bp) protein (476aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1227456 species="Archaea; Eu
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYQ4_9EURY
qh_6_scaffold_275_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4000..4407
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZ24_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50861.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_6_scaffold_275_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4409..4900)
DNA (492bp) protein (164aa)
argD; 4-aminobutyrate aminotransferase (EC:2.6.1.19)
Aminotransferase class-III n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2C1_9EURY
Aminotransferase class-III {ECO:0000313|EMBL:EMA50860.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae D
qh_6_scaffold_275_8
unknown

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4929..5801
DNA (873bp) protein (291aa)

This feature has no annotations

qh_6_scaffold_275_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5726..6001)
DNA (276bp) protein (92aa)
PadR-like family transcriptional regulator/DNA binding domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N176_9EURY
PadR-like family transcriptional regulator/DNA binding domain-containing protein {ECO:0000313|EMBL:EMA50859.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
PadR family transcriptional regulator
qh_6_scaffold_275_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6464..6610)
DNA (147bp) protein (49aa)
Uncharacterized protein n=2 Tax=Halococcus RepID=M0MJB6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50858.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_6_scaffold_275_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6930..7583)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYQ0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50857.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_6_scaffold_275_12
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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7974..8321
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LMY6_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG02300.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
qh_6_scaffold_275_13
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8466..9482
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LMY3_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM56721.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
qh_6_scaffold_275_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9616..10110)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2B7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50855.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_6_scaffold_275_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10214..10948
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MK87_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45798.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_6_scaffold_275_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11130..11669)
DNA (540bp) protein (180aa)
Mut/nudix family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZX7_9EURY
Mut/nudix family protein {ECO:0000313|EMBL:EMA50853.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
mutT6; Mut/nudix family protein
qh_6_scaffold_275_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11666..12913)
DNA (1248bp) protein (416aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYP4_9EURY
qh_6_scaffold_275_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13197..13754
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM31_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45794.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_6_scaffold_275_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14095..15378
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2B1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50850.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
YcaO-like family domain-containing protein
qh_6_scaffold_275_20
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15320..16291
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LXC2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA38091.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
qh_6_scaffold_275_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16491..17633)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N165_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50849.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
conserved hypothetical membrane protein (DUF63)
qh_6_scaffold_275_22
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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17817..18764
DNA (948bp) protein (316aa)
Putative homoserine kinase type II n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QG63_9EURY
Putative homoserine kinase type II {ECO:0000313|EMBL:EGQ43284.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
qh_6_scaffold_275_trna_2
unknown

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comp(19062..19145)
DNA (84bp)
transferRNA
qh_6_scaffold_275_23
unknown

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comp(19239..19631)
DNA (393bp) protein (131aa)

This feature has no annotations

qh_6_scaffold_275_24
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19714..20193
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZX2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50848.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_6_scaffold_275_25
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20362..21192
DNA (831bp) protein (277aa)
succinylglutamate desuccinylase (EC:3.1.-.-)
Succinylglutamate desuccinylase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1U0_9EURY
Succinylglutamate desuccinylase {ECO:0000313|EMBL:EMA51922.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailand
qh_6_scaffold_275_26
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21295..21744)
DNA (450bp) protein (150aa)
UPF0179 protein C450_14257 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N160_9EURY
UPF0179 protein C450_14257 {ECO:0000256|HAMAP-Rule:MF_00498}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
hypothetical protein
qh_6_scaffold_275_27
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21874..22215
DNA (342bp) protein (114aa)
Ferredoxin I 5 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZW8_9EURY
Ferredoxin I 5 {ECO:0000313|EMBL:EMA50843.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
ferredoxin
qh_6_scaffold_275_28
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22313..22699)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM22_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45784.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_6_scaffold_275_29
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23014..25086
DNA (2073bp) protein (691aa)
prkA1; probable PrkA-type serine/threonine protein kinase (EC:2.7.11.1)
Serine protein kinase, PrkA n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MK70_9EURY
Serine protein kinase, PrkA {ECO:0000313|EMBL:EMA45783.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyti
Displaying items 1-30 of 50 in total

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