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qh_6_scaffold_352

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_352_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..507)
DNA (507bp) protein (169aa)
archaeosine tRNA-ribosyltransferase type 2 (EC:2.4.2.-)
tRNA-guanine transglycosylase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MLY7_9EURY
tRNA-guanine transglycosylase {ECO:0000313|EMBL:EMA46702.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharoly
qh_6_scaffold_352_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(507..1019)
DNA (513bp) protein (171aa)
tRNA-guanine transglycosylase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBU9_9EURY
tRNA-guanine transglycosylase {ECO:0000313|EMBL:EMA55447.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
PUA domain containing protein
qh_6_scaffold_352_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1016..1279)
DNA (264bp) protein (88aa)
tRNA-guanine(15) transglycosylase {ECO:0000256|HAMAP-Rule:MF_01634}; EC=2.4.2.48 {ECO:0000256|HAMAP-Rule:MF_01634};; 7-cyano-7-deazaguanine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01634}; A
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
tRNA-guanine(15) transglycosylase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMU9_9EURY
qh_6_scaffold_352_4
unknown

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1660..2145
DNA (486bp) protein (162aa)

This feature has no annotations

qh_6_scaffold_352_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2637..3185)
DNA (549bp) protein (183aa)
NUDIX hydrolase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MPP6_9EURY
NUDIX hydrolase {ECO:0000313|EMBL:EMA46704.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350
NTP pyrophosphohydrolase
qh_6_scaffold_352_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3233..4327)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NED0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55444.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_6_scaffold_352_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4500..5477
DNA (978bp) protein (326aa)
Replication factor C small subunit n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDG0_9EURY
Replication factor C small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; Short=RFC small subunit {ECO:0000256|HAMAP-Rule:MF_01509};; Clamp loader small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; TaxID=12
DNA polymerase III, gamma/tau subunit
qh_6_scaffold_352_8
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5511..5756
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0K2C6_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB38509.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
qh_6_scaffold_352_9
Sulfolobus tokodaii, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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5707..6111
DNA (405bp) protein (135aa)
PIN domain protein n=1 Tax=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) RepID=Q972K7_SULTO
hypothetical protein
PIN domain protein {ECO:0000313|EMBL:BAB66159.1}; TaxID=273063 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source="Sulfolobus tokodaii (strain DSM 16993 /
qh_6_scaffold_352_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6184..6693)
DNA (510bp) protein (170aa)
Tryptophan-rich sensory protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBA8_9EURY
Tryptophan-rich sensory protein {ECO:0000313|EMBL:EMA42633.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharo
tryptophan-rich sensory protein
qh_6_scaffold_352_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


6840..9617
DNA (2778bp) protein (926aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017576}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017588};; Alanyl-tRNA synthetase {ECO:0000256
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDA5_9EURY
qh_6_scaffold_352_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9702..9944)
DNA (243bp) protein (81aa)
Excinuclease ABC C subunit domain protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC41_9EURY
Excinuclease ABC C subunit domain protein {ECO:0000313|EMBL:EMA55138.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
Excinuclease ABC C subunit domain-containing protein
qh_6_scaffold_352_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9968..10117)
DNA (150bp) protein (50aa)
Uncharacterized protein n=2 Tax=Halococcus RepID=M0MDD4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55139.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_6_scaffold_352_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10252..11019)
DNA (768bp) protein (256aa)
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEM6_9EURY
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase {ECO:0000313|EMBL:EMA55140.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Ha
purE; 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
qh_6_scaffold_352_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11143..11310
DNA (168bp) protein (56aa)
Uncharacterized protein n=2 Tax=Halococcus RepID=M0MGB9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43744.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_6_scaffold_352_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11409..11600
DNA (192bp) protein (64aa)
Thiamine biosynthesis protein ThiS ( sulfur donor) n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEL4_9EURY
Thiamine biosynthesis protein ThiS ( sulfur donor) {ECO:0000313|EMBL:EMA55125.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
thiamine biosynthesis protein ThiS ( sulfur donor)
qh_6_scaffold_352_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11655..12149
DNA (495bp) protein (165aa)
bcp; thioredoxin-dependent hydroperoxide peroxidase (EC:1.11.1.15)
Thioredoxin-dependent hydroperoxide peroxidase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NB99_9EURY
Thioredoxin-dependent hydroperoxide peroxidase {ECO:0000313|EMBL:EMA55126.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
qh_6_scaffold_352_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12191..12526
DNA (336bp) protein (112aa)
Acetyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAY6_9EURY
Acetyltransferase {ECO:0000313|EMBL:EMA55127.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;
acetyltransferase
qh_6_scaffold_352_19
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12561..13295)
DNA (735bp) protein (245aa)
probable oxidoreductase (short-chain dehydrogenase family) (EC:1.1.1.-)
Probable oxidoreductase (Short-chain dehydrogenase family) {ECO:0000313|EMBL:CCQ36013.1}; EC=1.1.1.- {ECO:0000313|EMBL:CCQ36013.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobac
Probable oxidoreductase (Short-chain dehydrogenase family) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y0M3_NATM8
qh_6_scaffold_352_20
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13454..14566)
DNA (1113bp) protein (371aa)
Amino acid/amide ABC transporter membrane protein 2, HAAT family n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTK7_HALBP
amino acid/amide ABC transporter membrane protein 2, haat family
Amino acid/amide ABC transporter membrane protein 2, HAAT family {ECO:0000313|EMBL:ADQ67059.1}; Amino acid/amide ABC transporter membrane protein 2, haat family {ECO:0000313|EMBL:ELY29606.1}; TaxID=46
qh_6_scaffold_352_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15596..16393)
DNA (798bp) protein (266aa)
ABC transporter-like protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLV9_9EURY
ABC transporter-like protein {ECO:0000313|EMBL:ELZ24260.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
ABC transporter
qh_6_scaffold_352_22
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16390..17124)
DNA (735bp) protein (245aa)
ABC transporter n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQU1_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ24259.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
amino acid/amide ABC transporter ATP-binding protein 1, haat family
qh_6_scaffold_352_23
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17148..18668)
DNA (1521bp) protein (507aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTK3_HALBP
amino acid/amide ABC transporter substrate-binding protein, haat family
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:ADQ67055.1}; Amino acid/amide ABC transporter substrate-binding protein, haat family {ECO:0000313|EMBL:ELY2960
qh_6_scaffold_352_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18809..19714
DNA (906bp) protein (302aa)
Alpha/beta fold family hydrolase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEJ0_9EURY
Alpha/beta fold family hydrolase {ECO:0000313|EMBL:EMA43753.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacchar
alpha/beta fold family hydrolase
Displaying 24 items

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