ggKbase home page

qh_6_scaffold_581

Search features with annotation key words

Displaying 29 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_581_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..183
DNA (183bp) protein (61aa)
Methylmalonyl-CoA mutase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIE3_9EURY
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:EMA44215.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
methylmalonyl-CoA mutase family protein
qh_6_scaffold_581_2
unknown

Not on your lists

comp(380..601)
DNA (222bp) protein (74aa)

This feature has no annotations

qh_6_scaffold_581_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1526..3016
DNA (1491bp) protein (497aa)
PHP domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVC4_9EURY
PHP domain-containing protein {ECO:0000313|EMBL:EMA49288.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
DNA polymerase X family protein
qh_6_scaffold_581_4
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3013..3459
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WVQ8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY53574.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
hypothetical protein
qh_6_scaffold_581_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3774..4736
DNA (963bp) protein (321aa)
Sugar nucleotidyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MU70_9EURY
Sugar nucleotidyltransferase {ECO:0000313|EMBL:EMA49287.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
nucleotidyl transferase
qh_6_scaffold_581_6
unknown

Not on your lists

4815..4946
DNA (132bp) protein (44aa)

This feature has no annotations

qh_6_scaffold_581_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4958..5695)
DNA (738bp) protein (246aa)
ATP binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHN8_9EURY
ATP binding protein {ECO:0000313|EMBL:EMA44219.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein
qh_6_scaffold_581_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5835..6263
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MV38_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49466.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_6_scaffold_581_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6318..6800
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYI7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49465.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_6_scaffold_581_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6825..7241
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXB2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49464.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_6_scaffold_581_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7309..8310
DNA (1002bp) protein (334aa)
NUDIX hydrolase family protein (EC:3.6.1.13)
NUDIX hydrolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVX4_9EURY
NUDIX hydrolase {ECO:0000313|EMBL:EMA49463.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
qh_6_scaffold_581_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8396..8779
DNA (384bp) protein (128aa)
Rhodanese n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MV32_9EURY
Rhodanese {ECO:0000313|EMBL:EMA49461.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
rhodanese domain-containing protein
qh_6_scaffold_581_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9316..11334)
DNA (2019bp) protein (673aa)
Transglutaminase-like enzyme, cysteine protease n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVW7_9EURY
Transglutaminase-like enzyme, cysteine protease {ECO:0000313|EMBL:EMA49458.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
transglutaminase-like protein, putative cysteine protease
qh_6_scaffold_581_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11331..12314)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUN9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49457.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_6_scaffold_581_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12311..13300)
DNA (990bp) protein (330aa)
Methanol dehydrogenase regulatory protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MV25_9EURY
Methanol dehydrogenase regulatory protein {ECO:0000313|EMBL:EMA49456.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
ATPase
qh_6_scaffold_581_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13534..14079
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYH5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49455.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_6_scaffold_581_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14080..15165)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEQ0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44232.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_6_scaffold_581_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15448..15873)
DNA (426bp) protein (142aa)
NUDIX hydrolase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFT4_9EURY
NUDIX hydrolase {ECO:0000313|EMBL:EMA44233.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350
NUDIX hydrolase
qh_6_scaffold_581_19
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15969..16706)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0K4H0_9EURY
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
Uncharacterized protein {ECO:0000313|EMBL:AGB39911.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
qh_6_scaffold_581_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


16841..17167
DNA (327bp) protein (109aa)
30S ribosomal protein S10 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUN3_9EURY
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
30S ribosomal protein S10
qh_6_scaffold_581_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17175..18194)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CET6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ21770.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
ABC-2 type transporter
qh_6_scaffold_581_22
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18191..18559)
DNA (369bp) protein (123aa)
sulfate-transporting ATPase (EC:3.6.3.25)
ABC transporter n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PAY6_9EURY
ABC transporter {ECO:0000313|EMBL:EMA65985.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560.;"
qh_6_scaffold_581_23
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19270..20598
DNA (1329bp) protein (443aa)
Indole-3-acetyl-L-aspartic acid hydrolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYH0_9EURY
Indole-3-acetyl-L-aspartic acid hydrolase {ECO:0000313|EMBL:EMA49450.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
indole-3-acetyl-L-aspartic acid hydrolase
qh_6_scaffold_581_24
unknown

Not on your lists

comp(20640..20888)
DNA (249bp) protein (83aa)

This feature has no annotations

qh_6_scaffold_581_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21132..23396)
DNA (2265bp) protein (755aa)
ATPase AAA n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEQ5_9EURY
ATPase AAA {ECO:0000313|EMBL:EMA44237.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
AAA-type ATPase (transitional ATPase homolog)
qh_6_scaffold_581_26
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23393..23632)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFU0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44238.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
qh_6_scaffold_581_27
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23863..24651
DNA (789bp) protein (263aa)
Alpha/beta fold family hydrolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX50_9EURY
Alpha/beta fold family hydrolase {ECO:0000313|EMBL:EMA49409.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifod
hydrolase or acyltransferase of alpha/beta superfamily protein
qh_6_scaffold_581_28
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24688..25653
DNA (966bp) protein (322aa)
Peptidase A24B, FlaK domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIG1_9EURY
Peptidase A24B, FlaK domain-containing protein {ECO:0000313|EMBL:EMA44240.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
peptidase A24B, FlaK domain protein
qh_6_scaffold_581_29
unknown

Not on your lists

comp(25685..25936)
DNA (252bp) protein (84aa)

This feature has no annotations

Displaying 29 items

View Taxonomy