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qh_6_scaffold_2539

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_2539_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..539
DNA (537bp) protein (179aa)
30S ribosomal protein S4 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RS4_NATPD
rps4p; 30S ribosomal protein S4P
30S ribosomal protein S4 {ECO:0000255|HAMAP-Rule:MF_01306}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
qh_6_scaffold_2539_2
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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536..919
DNA (384bp) protein (128aa)
30S ribosomal protein S11 n=1 Tax=Haloquadratum sp. J07HQX50 RepID=U1NLU8_9EURY
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum sp. J07H
rps11; 30S ribosomal protein S11
qh_6_scaffold_2539_3
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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921..1667
DNA (747bp) protein (249aa)
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit D n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSE6_9EURY
RNA polymerase insert
qh_6_scaffold_2539_trna_1
unknown

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1806..1890
DNA (85bp)
transferRNA
qh_6_scaffold_2539_4
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1921..2187
DNA (267bp) protein (89aa)
50S ribosomal protein L18e n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NMY6_HALUD
50S ribosomal protein L18e
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329, ECO:0000256|RuleBase:RU000573}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.
qh_6_scaffold_2539_5

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2184..2618
DNA (435bp) protein (145aa)
50S ribosomal protein L13 n=1 Tax=uncultured archaeon A07HB70 RepID=V4XUY4_9ARCH
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
rpl13p; 50S ribosomal protein L13P
qh_6_scaffold_2539_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2612..3010
DNA (399bp) protein (133aa)
30S ribosomal protein S9 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQT3_NATPD
rps9p; 30S ribosomal protein S9P
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003817}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;
qh_6_scaffold_2539_7
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3022..3216
DNA (195bp) protein (65aa)
DNA-directed RNA polymerase subunit n (EC:2.7.7.6)
DNA-directed RNA polymerase subunit N {ECO:0000256|HAMAP-Rule:MF_00250}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00250};; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halof
DNA-directed RNA polymerase subunit N n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NRQ1_HALBP
qh_6_scaffold_2539_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3213..3389
DNA (177bp) protein (59aa)
rpoK; DNA-directed RNA polymerase subunit K (EC:2.7.7.6)
DNA-directed RNA polymerase subunit K {ECO:0000256|HAMAP-Rule:MF_00192}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00192};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit K n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XL15_NATM8
qh_6_scaffold_2539_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3386..4582
DNA (1197bp) protein (399aa)
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase {ECO:0000255|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000255|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000255|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
Enolase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=ENO_NATPD
qh_6_scaffold_2539_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4579..5361
DNA (783bp) protein (261aa)
30S ribosomal protein S2 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRP6_NATM8
rps2; 30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291, ECO:0000256|SAAS:SAAS00012212}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;
qh_6_scaffold_2539_11
unknown

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comp(5374..5868)
DNA (495bp) protein (165aa)

This feature has no annotations

Displaying 12 items

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