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qh_6_scaffold_2996

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_2996_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..488
DNA (486bp) protein (162aa)
cca; tRNA CCA-pyrophosphorylase (EC:2.7.7.25 2.7.7.21)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:
CCA-adding enzyme n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUD0_NATPD
qh_6_scaffold_2996_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(489..1493)
DNA (1005bp) protein (335aa)
HdaI-type histone deacetylase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKB2_NATM8
hda1; HdaI-type histone deacetylase
HdaI-type histone deacetylase {ECO:0000313|EMBL:CCQ35579.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolape
qh_6_scaffold_2996_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1981..2421)
DNA (441bp) protein (147aa)
Archaeal histone n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUD2_NATPD
hstA; histone
Archaeal histone {ECO:0000313|EMBL:CAI48249.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain AT
qh_6_scaffold_2996_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2756..3295)
DNA (540bp) protein (180aa)
UPF0218 protein Hmuk_0726 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZU9_HALMD
hypothetical protein
UPF0218 protein Hmuk_0726 {ECO:0000256|HAMAP-Rule:MF_00590}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukoh
qh_6_scaffold_2996_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3295..3492)
DNA (198bp) protein (66aa)
rpoE2; DNA-directed RNA polymerase subunit E'' (EC:2.7.7.6)
Transcription elongation factor Spt4 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMM8_NATPD
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomo
qh_6_scaffold_2996_6
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3492..4073)
DNA (582bp) protein (194aa)
DNA-directed RNA polymerase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NUL7_HALUD
DNA-directed RNA polymerase subunit E'
DNA-directed RNA polymerase {ECO:0000313|EMBL:ACV12374.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (
qh_6_scaffold_2996_7
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4073..4441)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JJW8_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA09427.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
rpo operon protein
qh_6_scaffold_2996_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4438..4881)
DNA (444bp) protein (148aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=IF2G_NATPD
Suspect SCG annotation. See neighboring gene [qh_6_scaffold_2996_9].
tif2g; translation initiation factor IF-2 subunit gamma
Translation initiation factor 2 subunit gamma {ECO:0000255|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000255|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000255|HAMAP-Rule:MF_00119}; TaxID=348780 species="Arch
qh_6_scaffold_2996_9
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4857..5585)
DNA (729bp) protein (243aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DF34_9EURY
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=1227487 species="Arc
tif2g; translation initiation factor aIF-2 subunit gamma
qh_6_scaffold_2996_10
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6093..7019
DNA (927bp) protein (309aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QNE8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93943.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qh_6_scaffold_2996_11
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7096..7332
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V4E9_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV45603.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
qh_6_scaffold_2996_12
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7339..8214
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V4F0_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV45602.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
qh_6_scaffold_2996_13
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8336..9007
DNA (672bp) protein (224aa)
Haloacid dehalogenase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JHZ8_HALVA
haloacid dehalogenase
Haloacid dehalogenase {ECO:0000313|EMBL:EMA07619.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 2
qh_6_scaffold_2996_14
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9054..9680
DNA (627bp) protein (209aa)
Sjogrens syndrome scleroderma autoantigen 1 protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PQ74_9EURY
hypothetical protein
Sjogrens syndrome scleroderma autoantigen 1 protein {ECO:0000313|EMBL:ERJ05046.1}; Uncharacterized protein {ECO:0000313|EMBL:CCQ33086.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; H
qh_6_scaffold_2996_15
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(9677..12088)
DNA (2412bp) protein (804aa)
hef; ATP-dependent RNA helicase/nuclease Hef (EC:3.6.4.13)
Hef nuclease n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D8L1_9EURY
Hef nuclease {ECO:0000313|EMBL:ELZ31173.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.;"
Displaying 15 items

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