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qh_6_scaffold_337

Search features with annotation key words

Displaying items 1-30 of 44 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_337_1
unknown

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3..395
DNA (393bp) protein (131aa)

This feature has no annotations

qh_6_scaffold_337_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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460..852
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQU6_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI49498.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qh_6_scaffold_337_3
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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960..1532
DNA (573bp) protein (191aa)
Response regulator receiver protein n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BV97_9EURY
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ELZ13569.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JC
qh_6_scaffold_337_4
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1706..2689)
DNA (984bp) protein (328aa)
Probable cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Ru
Probable cyclic pyranopterin monophosphate synthase n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9WFY3_9EURY
putative molybdenum cofactor biosynthesis protein A, archaeal
qh_6_scaffold_337_5
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2839..3768
DNA (930bp) protein (310aa)
Putative transcriptional regulator, ArsR family protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQR8_9EURY
Putative transcriptional regulator, ArsR family protein {ECO:0000313|EMBL:EFW93332.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" so
ArsR family transcriptional regulator
qh_6_scaffold_337_6
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3650..4393)
DNA (744bp) protein (248aa)
proteasome subunit alpha (EC:3.4.25.1)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
Proteasome subunit alpha n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NVQ5_HALMD
qh_6_scaffold_337_7
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4395..5030)
DNA (636bp) protein (212aa)
Proteasome endopeptidase complex (EC:3.4.25.1)
Proteasome subunit beta {ECO:0000255|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000255|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000255|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {
Proteasome subunit beta n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=PSB_HALUD
qh_6_scaffold_337_8
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5396..5575
DNA (180bp) protein (60aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IBF7_9EURY
hypothetical protein
RNA-binding protein {ECO:0000313|EMBL:AHG04210.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
qh_6_scaffold_337_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5577..5843
DNA (267bp) protein (89aa)
Elongation factor 1-beta n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DJJ7_9EURY
Elongation factor 1-beta {ECO:0000256|HAMAP-Rule:MF_00043, ECO:0000256|SAAS:SAAS00044427}; Short=EF-1-beta {ECO:0000256|HAMAP-Rule:MF_00043};; aEF-1beta {ECO:0000256|HAMAP-Rule:MF_00043}; TaxID=797114
elongation factor 1-beta
qh_6_scaffold_337_10
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5946..6269
DNA (324bp) protein (108aa)
50S ribosomal protein L21e n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KQH8_HALAR
50S ribosomal protein L21
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.
qh_6_scaffold_337_11
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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6269..6625
DNA (357bp) protein (119aa)
RNA polymerase Rpb4 n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D4D8_HALXS
RNA polymerase Rpb4
RNA polymerase Rpb4 {ECO:0000313|EMBL:AEH38678.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 18323
qh_6_scaffold_337_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6668..7252
DNA (585bp) protein (195aa)
RNA-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MTY1_9EURY
RNA-binding protein {ECO:0000313|EMBL:EMA49056.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989
RNA-binding protein
qh_6_scaffold_337_13
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


7662..8081
DNA (420bp) protein (140aa)
ksgA; 16S rRNA methyltransferase (EC:2.1.1.-)
Probable ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rul
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KNP5_9EURY
qh_6_scaffold_337_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8078..9232
DNA (1155bp) protein (385aa)
Mechanosensitive channel protein MscS n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPM1_NATPD
msc_5; mechanosensitive channel
Mechanosensitive channel protein MscS {ECO:0000313|EMBL:CAI49929.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas
qh_6_scaffold_337_15
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9210..9752
DNA (543bp) protein (181aa)
Methylase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QS76_9EURY
Methylase {ECO:0000313|EMBL:EFW92845.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX253.;"
methylase
qh_6_scaffold_337_16
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9811..10806
DNA (996bp) protein (332aa)
Cobalamin-independent synthase MetE domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZK6_HALMD
Cobalamin-independent synthase MetE domain-containing protein
Cobalamin-independent synthase MetE domain protein {ECO:0000313|EMBL:ACV48774.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halo
qh_6_scaffold_337_17
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10803..11771
DNA (969bp) protein (323aa)
metE_1; methionine synthase (EC:2.1.1.14)
Methionine synthase n=1 Tax=haloarchaeon 3A1_DGR RepID=T0U513_9EURY
Methionine synthase {ECO:0000313|EMBL:EMA38865.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;
qh_6_scaffold_337_18

Not on your lists

11926..12243
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LHE4_HALJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN04987.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qh_6_scaffold_337_19
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12240..13238)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JN18_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA09060.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
qh_6_scaffold_337_20
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13235..13651)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JJ90_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA09061.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
qh_6_scaffold_337_21
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13648..14295)
DNA (648bp) protein (216aa)
Formate dehydrogenase, iron-sulfur subunit {ECO:0000313|EMBL:AEM57519.1}; EC=1.2.1.2 {ECO:0000313|EMBL:AEM57519.1};; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Haloba
Formate dehydrogenase-O iron-sulfur subunit n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K8D0_9EURY
formate dehydrogenase
qh_6_scaffold_337_22
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14328..17690)
DNA (3363bp) protein (1121aa)
Formate dehydrogenase subunit alpha n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LLQ0_HALJP
Formate dehydrogenase subunit alpha {ECO:0000313|EMBL:EMA32955.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japo
formate dehydrogenase
qh_6_scaffold_337_23

Not on your lists

comp(18130..18825)
DNA (696bp) protein (232aa)
Transcriptional regulator, ModE family n=1 Tax=halophilic archaeon DL31 RepID=G2MK52_9ARCH
ModE family transcriptional regulator
Transcriptional regulator, ModE family {ECO:0000313|EMBL:AEN05474.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qh_6_scaffold_337_24
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19009..21135
DNA (2127bp) protein (709aa)
Ferridoxin n=1 Tax=Haloarcula hispanica N601 RepID=V5TLS0_HALHI
ferridoxin
Ferridoxin {ECO:0000313|EMBL:AJF24588.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
qh_6_scaffold_337_25
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21132..21758
DNA (627bp) protein (209aa)
Cytoplasmic chaperone TorD n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JN21_HALVA
Cytoplasmic chaperone TorD {ECO:0000313|EMBL:EMA09065.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis A
molecular chaperone TorD
qh_6_scaffold_337_26
unknown

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comp(21755..21985)
DNA (231bp) protein (77aa)

This feature has no annotations

qh_6_scaffold_337_27
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21978..22274)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V2J3_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV46259.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
qh_6_scaffold_337_28
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22504..23799
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K4H1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA16096.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
qh_6_scaffold_337_29
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23847..24194)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LKJ7_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA32964.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
qh_6_scaffold_337_30
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24191..24337)
DNA (147bp) protein (49aa)
Uncharacterized protein n=2 Tax=Haloarcula RepID=M0K7H9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA32965.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
Displaying items 1-30 of 44 in total

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