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qh_6_scaffold_494

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_494_1

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comp(2..3643)
DNA (3642bp) protein (1214aa)
DNA polymerase III, delta subunit n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y1V2_9ARCH
DNA polymerase III, delta subunit {ECO:0000313|EMBL:ESS06606.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
replication factor C small subunit
qh_6_scaffold_494_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3735..4775)
DNA (1041bp) protein (347aa)
arcB; ornithine cyclodeaminase (EC:4.3.1.12)
Alanine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00935}; Short=AlaDH {ECO:0000256|HAMAP-Rule:MF_00935};; EC=1.4.1.1 {ECO:0000256|HAMAP-Rule:MF_00935};; TaxID=348780 species="Archaea; Euryarchaeota; Ha
Alanine dehydrogenase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU68_NATPD
qh_6_scaffold_494_3
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4993..6693)
DNA (1701bp) protein (567aa)
Thermosome n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D799_HALXS
thermosome
Thermosome {ECO:0000313|EMBL:AEH36667.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 18323 / JCM 14
qh_6_scaffold_494_4
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6867..7253)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KY56_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA26207.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
qh_6_scaffold_494_5
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12607..12882)
DNA (276bp) protein (92aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A865_9EURY
cas2; CRISPR-associated Cas2 family protein
qh_6_scaffold_494_6
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12873..13865)
DNA (993bp) protein (331aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halob
CRISPR-associated endonuclease Cas1 n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V7X5_HALMA
cas1; CRISPR-associated Cas1 family protein
qh_6_scaffold_494_7
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13868..14440)
DNA (573bp) protein (191aa)
CRISPR-associated protein Cas4 n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V7X0_HALMA
cas4; CRISPR-associated Cas4 family protein
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:AAV44425.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortu
qh_6_scaffold_494_8
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(14437..15630)
DNA (1194bp) protein (398aa)
Putative helicase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NNV2_HALUD
helicase
Putative helicase {ECO:0000313|EMBL:ACV11627.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (strain DSM
qh_6_scaffold_494_9
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(15655..17040)
DNA (1386bp) protein (462aa)
CRISPR-associated helicase Cas3 n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9VWC5_9EURY
CRISPR-associated helicase Cas3 {ECO:0000313|EMBL:ELY41479.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidif
helicase
qh_6_scaffold_494_10
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(17042..17836)
DNA (795bp) protein (265aa)
CRISPR-associated protein Cas5, Hmari subtype n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0B5U0_9EURY
CRISPR-associated protein Cas5, Hmari subtype {ECO:0000313|EMBL:ELZ04989.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba ch
CRISPR-associated protein Cas5, subtype I-B/HMARI
qh_6_scaffold_494_11
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(17839..18924)
DNA (1086bp) protein (362aa)
CRISPR-associated protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LPY7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CQR53163.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI
qh_6_scaffold_494_12
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(18926..21043)
DNA (2118bp) protein (706aa)
Uncharacterized protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A5R2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:GAD52994.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
CRISPR-associated protein, Csh1
qh_6_scaffold_494_13
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(21030..21674)
DNA (645bp) protein (215aa)
CRISPR-associated protein Cas6 n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PNQ2_9EURY
CRISPR-associated protein, Cas6
CRISPR-associated protein Cas6 {ECO:0000313|EMBL:ERJ06789.1}; CRISPR-associated protein, Cas6 {ECO:0000313|EMBL:CCQ33712.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriale
qh_6_scaffold_494_trna_1
unknown

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comp(25956..26036)
DNA (81bp)
transferRNA
qh_6_scaffold_494_14
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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26333..27199
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGQ1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ33902.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
qh_6_scaffold_494_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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27251..29260
DNA (2010bp) protein (670aa)
DNA-binding protein MutS2 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITZ9_NATPD
mutS_3; DNA mismatch repair protein MutS-like protein
DNA-binding protein MutS2 {ECO:0000256|HAMAP-Rule:MF_00971}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
qh_6_scaffold_494_16
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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29656..30774
DNA (1119bp) protein (373aa)
ORC1-type DNA replication protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLP0_NATM8
orc2; Orc1-type DNA replication protein
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas
qh_6_scaffold_494_17
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(30802..33126)
DNA (2325bp) protein (775aa)
rad3b; DNA repair helicase Rad3 (EC:3.6.4.12)
DNA repair helicase Rad3 {ECO:0000313|EMBL:CCQ37987.1}; EC=3.6.4.12 {ECO:0000313|EMBL:CCQ37987.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natro
DNA repair helicase Rad3 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTW6_NATM8
qh_6_scaffold_494_18
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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33500..35029
DNA (1530bp) protein (510aa)
hypothetical protein id=24616679 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP87266.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qh_6_scaffold_494_19
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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35026..35754
DNA (729bp) protein (243aa)
Antimicrobial peptide ABC transporter ATPase n=1 Tax=Halogranum salarium B-1 RepID=J3EY68_9EURY
Antimicrobial peptide ABC transporter ATPase {ECO:0000313|EMBL:EJN60207.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-
antimicrobial peptide ABC transporter ATPase
qh_6_scaffold_494_20
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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35772..36365
DNA (594bp) protein (198aa)
Antimicrobial peptides ABC transporter permease n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HB40_9EURY
Antimicrobial peptides ABC transporter permease {ECO:0000313|EMBL:ESP87268.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" s
hypothetical protein
Displaying 21 items

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